RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 THPOP40225 353 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 TAF6P49848 677 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 NFX1Q12986 1120 aaKnown RBP13.49□□□□□ -0.25
PAAF1-214ENST00000544552 CYP1B1Q16678 543 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
PAAF1-214ENST00000544552 SV2CQ496J9 727 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 PHLDB2Q86SQ0 1253 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 CPNE8Q86YQ8 564 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 SLC13A5Q86YT5 568 aaPredicted RBP13.49□□□□□ -0.25
PAAF1-214ENST00000544552 CRYBG2Q8N1P7 616 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 AENQ8WTP8 325 aaKnown RBP13.49□□□□□ -0.25
PAAF1-214ENST00000544552 DDX27Q96GQ7 796 aaKnown RBP13.49□□□□□ -0.25
PAAF1-214ENST00000544552 MRPL45Q9BRJ2 306 aaKnown RBP13.49□□□□□ -0.25
PAAF1-214ENST00000544552 CYTH4Q9UIA0 394 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 GIT1Q9Y2X7 761 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 PTGESO14684 152 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 INHAP05111 366 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 SETSIPP0DME0 302 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 RAB27AP51159 221 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 RPL7AP62424 266 aaKnown RBP13.48□□□□□ -0.25
PAAF1-214ENST00000544552 SOX4Q06945 474 aaPredicted RBP13.48□□□□□ -0.25
PAAF1-214ENST00000544552 PKDCCQ504Y2 493 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 ARHGAP17Q68EM7 881 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 EMBQ6PCB8 327 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 DCUN1D2Q6PH85 259 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 KATNAL2Q8IYT4 538 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 TOP6BLQ8N6T0 577 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 STK32AQ8WU08 396 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 MAIP1Q8WWC4 291 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 SEC14L1Q92503 715 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 GLT1D1Q96MS3 346 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 RUNDC3BQ96NL0 473 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 CPXM1Q96SM3 734 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 DDX47Q9H0S4 455 aaKnown RBP13.48□□□□□ -0.25
PAAF1-214ENST00000544552 VIPAS39Q9H9C1 493 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 AGO3Q9H9G7 860 aaKnown RBP13.48□□□□□ -0.25
PAAF1-214ENST00000544552 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 MTUS1Q9ULD2 1270 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 NR2E1Q9Y466 385 aa13.48□□□□□ -0.25
PAAF1-214ENST00000544552 FAM187AA6NFU0 413 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 M0QYV0 167 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 CTSHP09668 335 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 MYBL2P10244 700 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 KRT3P12035 628 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 CHRNA3P32297 505 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 EPHB4P54760 987 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 GUCY2DQ02846 1103 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 PDCLQ13371 301 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 ORC1Q13415 861 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 DHX34Q14147 1143 aaKnown RBP13.47□□□□□ -0.25
PAAF1-214ENST00000544552 DSC3Q14574 896 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 CASP8Q14790 479 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 ACAP1Q15027 740 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 LHX8Q68G74 356 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 XYLT1Q86Y38 959 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 KRT222Q8N1A0 295 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 SLC43A3Q8NBI5 491 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 GSTCDQ8NEC7 633 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 MCRS1Q96EZ8 462 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 HMX1Q9NP08 348 aaPredicted RBP13.47□□□□□ -0.25
PAAF1-214ENST00000544552 PCYOX1Q9UHG3 505 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 TSPAN16Q9UKR8 245 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 PADI3Q9ULW8 664 aa13.47□□□□□ -0.25
PAAF1-214ENST00000544552 A0A0U1RQF3 1178 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 SPTLC1O15269 473 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 PHF2O75151 1096 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
PAAF1-214ENST00000544552 SKIP12755 728 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 GNL1P36915 607 aaPredicted RBP13.46□□□□□ -0.25
PAAF1-214ENST00000544552 SNX16P57768 344 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 LILRA4P59901 499 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 PSMC1P62191 440 aaKnown RBP13.46□□□□□ -0.25
PAAF1-214ENST00000544552 MRPS25P82663 173 aaKnown RBP13.46□□□□□ -0.25
PAAF1-214ENST00000544552 ZNF252P-AS1Q0IIN9 211 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 PAK2Q13177 524 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 NNTQ13423 1086 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 CUL1Q13616 776 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 AADACL2Q6P093 401 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 PRELID2Q8N945 189 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 C12orf50Q8NA57 414 aaPredicted RBP13.46□□□□□ -0.25
PAAF1-214ENST00000544552 APPL2Q8NEU8 664 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 EXD1Q8NHP7 514 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 IPO4Q8TEX9 1081 aaKnown RBP13.46□□□□□ -0.25
PAAF1-214ENST00000544552 SH3TC2Q8TF17 1288 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 KBTBD7Q8WVZ9 684 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 CAVIN3Q969G5 261 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 MCEEQ96PE7 176 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 SEZ6LQ9BYH1 1024 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 UBXN6Q9BZV1 441 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 AMACRQ9UHK6 382 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 NOD1Q9Y239 953 aa13.46□□□□□ -0.25
PAAF1-214ENST00000544552 A8MXQ7 604 aa13.46□□□□□ -0.26
PAAF1-214ENST00000544552 HUS1O60921 280 aa13.46□□□□□ -0.26
PAAF1-214ENST00000544552 ERBB2P04626 1255 aa13.46□□□□□ -0.26
PAAF1-214ENST00000544552 THP07101 528 aa13.46□□□□□ -0.26
PAAF1-214ENST00000544552 PFKMP08237 780 aa13.46□□□□□ -0.26
PAAF1-214ENST00000544552 WARSP23381 471 aaKnown RBP13.46□□□□□ -0.26
PAAF1-214ENST00000544552 RPL9P32969 192 aaKnown RBP13.46□□□□□ -0.26
PAAF1-214ENST00000544552 PLA2G4AP47712 749 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms