RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 KYAT1Q16773 422 aa18.68■□□□□ 0.58
SCARB1-208ENST00000544327 ANKRD20A8PQ5CZ79 823 aa18.68■□□□□ 0.58
SCARB1-208ENST00000544327 TXNRD3NBQ6F5E7 133 aa18.68■□□□□ 0.58
SCARB1-208ENST00000544327 C1orf127Q8N9H9 656 aa18.68■□□□□ 0.58
SCARB1-208ENST00000544327 SLC35B2Q8TB61 432 aa18.68■□□□□ 0.58
SCARB1-208ENST00000544327 CFAP57Q96MR6 1250 aa18.68■□□□□ 0.58
SCARB1-208ENST00000544327 PWWP2AQ96N64 755 aa18.68■□□□□ 0.58
SCARB1-208ENST00000544327 RBM15Q96T37 977 aaKnown RBP eCLIP18.68■□□□□ 0.588e-13■■■■□ 23
SCARB1-208ENST00000544327 PHACTR1Q9C0D0 580 aa18.68■□□□□ 0.58
SCARB1-208ENST00000544327 FAM124BQ9H5Z6 455 aaPredicted RBP18.68■□□□□ 0.58
SCARB1-208ENST00000544327 DNAJC17Q9NVM6 304 aaKnown RBP18.68■□□□□ 0.58
SCARB1-208ENST00000544327 TPX2Q9ULW0 747 aaKnown RBP18.68■□□□□ 0.58
SCARB1-208ENST00000544327 ZNF148Q9UQR1 794 aa18.68■□□□□ 0.58
SCARB1-208ENST00000544327 GOLGA6L7A0A1B0GV03 622 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 TMEM120BA0PK00 339 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 GPR25O00155 361 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 GJB1P08034 283 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 NFICP08651 508 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 KRT3P12035 628 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 PSMA2P25787 234 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 ZNF268Q14587 947 aaPredicted RBP18.67■□□□□ 0.58
SCARB1-208ENST00000544327 AMHR2Q16671 573 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 ZFYVE27Q5T4F4 411 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 TDRPQ86YL5 185 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 ANKS4BQ8N8V4 417 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 SDCBP2Q9H190 292 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 ASB7Q9H672 318 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 IFT122Q9HBG6 1241 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 NXF1Q9UBU9 619 aaKnown RBP18.67■□□□□ 0.58
SCARB1-208ENST00000544327 CYTH4Q9UIA0 394 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 SHOC2Q9UQ13 582 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 MCM3APO60318 1980 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 LRRD1A4D1F6 860 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 LACTBL1A8MY62 500 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 MAGEB2O15479 319 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 IQCF3P0C7M6 154 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 CD19P15391 556 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 RFC1P35251 1148 aaPredicted RBP18.67■□□□□ 0.58
SCARB1-208ENST00000544327 GABRB2P47870 512 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 ARSEP51690 589 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 ACAP1Q15027 740 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 RNASEH2BQ5TBB1 312 aaKnown RBP18.67■□□□□ 0.58
SCARB1-208ENST00000544327 TMEM192Q8IY95 271 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 CCDC13Q8IYE1 715 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 GLIS1Q8NBF1 620 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 SLC4A11Q8NBS3 891 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 SAMD15Q9P1V8 674 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 CTNNAL1Q9UBT7 734 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 NAALADL1Q9UQQ1 740 aa18.67■□□□□ 0.58
SCARB1-208ENST00000544327 CCT8L1PA6NM43 557 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 CILPO75339 1184 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 STAG3L1P0CL83 205 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 OSTNP61366 133 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 PSMC1P62191 440 aaKnown RBP18.66■□□□□ 0.58
SCARB1-208ENST00000544327 ARHGAP1Q07960 439 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 NR1H3Q13133 447 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 LAMC2Q13753 1193 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 HADHQ16836 314 aaKnown RBP18.66■□□□□ 0.58
SCARB1-208ENST00000544327 TMEM132AQ24JP5 1023 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 PRUNE1Q86TP1 453 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 XYLT1Q86Y38 959 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 ARFGAP1Q8N6T3 406 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 TTC13Q8NBP0 860 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 EFCC1Q9HA90 598 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 PPCSQ9HAB8 311 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 COL1A2P08123 1366 aa18.66■□□□□ 0.58
SCARB1-208ENST00000544327 LRCH4O75427 683 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 STAU1O95793 577 aaKnown RBP18.65■□□□□ 0.58
SCARB1-208ENST00000544327 OAS1P00973 400 aaKnown RBP18.65■□□□□ 0.58
SCARB1-208ENST00000544327 CETPP11597 493 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 RAP1GAPP47736 663 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 PTPN11Q06124 597 aaPredicted RBP18.65■□□□□ 0.58
SCARB1-208ENST00000544327 GPS1Q13098 491 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 WDR72Q3MJ13 1102 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 BBS12Q6ZW61 710 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 CYP4X1Q8N118 509 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 JOSD2Q8TAC2 188 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 GTF3C2Q8WUA4 911 aaPredicted RBP18.65■□□□□ 0.58
SCARB1-208ENST00000544327 CKAP2Q8WWK9 683 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 MCRS1Q96EZ8 462 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 C9orf72Q96LT7 481 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 RNPEPQ9H4A4 650 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 PDZD7Q9H5P4 517 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 SAYSD1Q9NPB0 183 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 PDGFCQ9NRA1 345 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 ALOX15BO15296 676 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 VIMP08670 466 aaKnown RBP18.65■□□□□ 0.58
SCARB1-208ENST00000544327 KRT19P08727 400 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 ZSCAN5DPP0CG00 497 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 BRAFP15056 766 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 CREB1P16220 341 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 RASA2Q15283 850 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 TMEM63BQ5T3F8 832 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 JADE1Q6IE81 842 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 PCGF5Q86SE9 256 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 SUGP1Q8IWZ8 645 aaKnown RBP18.65■□□□□ 0.58
SCARB1-208ENST00000544327 MAML1Q92585 1016 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 OPTNQ96CV9 577 aa18.65■□□□□ 0.58
SCARB1-208ENST00000544327 TMEM176AQ96HP8 235 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms