RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 CDY1Q9Y6F8 540 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 PTPN13Q12923 2485 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 ZMYM2Q9UBW7 1377 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 CASTOR2A6NHX0 329 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 CCDC69A6NI79 296 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 H0Y626 953 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 hCG_1984214I3L0E3 225 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 KHNYNO15037 678 aaKnown RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 GAS7O60861 476 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 PSMD10O75832 226 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 RHOBTB1O94844 696 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 TRIM16O95361 564 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 SEC24AO95486 1093 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 LRG1P02750 347 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 GJA1P17302 382 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 ARF4P18085 180 aaPredicted RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 AXLP30530 894 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 NOS2P35228 1153 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 NPEPPSP55786 919 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 FAM193AP78312 1265 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 EXOSC10Q01780 885 aaKnown RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 ELAVL2Q12926 359 aaKnown RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 PCBP1Q15365 356 aaKnown RBP eCLIP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 ELF2Q15723 593 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 LARP1BQ659C4 914 aaKnown RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 PLA2G4FQ68DD2 849 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 CD300LGQ6UXG3 332 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 NFXL1Q6ZNB6 911 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 PDZD4Q76G19 769 aaPredicted RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 RAB44Q7Z6P3 723 aaPredicted RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 TCEAL8Q8IYN2 117 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 CAMKK1Q8N5S9 505 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 ZNF713Q8N859 430 aaPredicted RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 RNF149Q8NC42 400 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 TTC16Q8NEE8 873 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 RDM1Q8NG50 284 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 ZNF461Q8TAF7 563 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 EXOC6Q8TAG9 804 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 TTC8Q8TAM2 541 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 PSPC1Q8WXF1 523 aaKnown RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 SLC5A5Q92911 643 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 LRIG1Q96JA1 1093 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 JPH2Q9BR39 696 aaPredicted RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 NIF3L1Q9GZT8 377 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 CXCL16Q9H2A7 254 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 SLC32A1Q9H598 525 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 DHX33Q9H6R0 707 aaKnown RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 NEUROD4Q9HD90 331 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 POLMQ9NP87 494 aaPredicted RBP5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 CEP72Q9P209 647 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 STIM2Q9P246 746 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 SLC8A2Q9UPR5 921 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 NUP205Q92621 2012 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 PIEZO2Q9H5I5 2752 aa5.34□□□□□ -1.55
NPIPB4-219ENST00000543660 PDCD11Q14690 1871 aaKnown RBP5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 UPK3BL1B0FP48 263 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 UPK3BL2E5RIL1 263 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 PTGESO14684 152 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 ASAP2O43150 1006 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 B4GALT5O43286 388 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 FZD6O60353 706 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 ERLIN2O94905 339 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 PLA2G2AP14555 144 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 ATF2P15336 505 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 MZF1P28698 734 aaPredicted RBP5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 ST13P50502 369 aaKnown RBP5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 EPHA5P54756 1037 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 PTENP60484 403 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 RELBQ01201 579 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 ROR1Q01973 937 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 MBTD1Q05BQ5 628 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 POU5F1BQ06416 359 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 TNK2Q07912 1038 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 SEMA3BQ13214 749 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 TEAD2Q15562 447 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 TMEM196Q5HYL7 178 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 CYP4A22Q5TCH4 519 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 LRCH2Q5VUJ6 765 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 PMS2CLQ68D20 193 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 SLC8B1Q6J4K2 584 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 FSTL4Q6MZW2 842 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 FOXR1Q6PIV2 292 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 CASC1Q6TDU7 716 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 CCNI2Q6ZMN8 369 aaPredicted RBP5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 ANKS3Q6ZW76 656 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 MIER3Q7Z3K6 550 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 CDR2LQ86X02 465 aaPredicted RBP5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 MICU3Q86XE3 530 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 YAF2Q8IY57 180 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 Q8N3U1 123 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 SLC7A3Q8WY07 619 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 E2F7Q96AV8 911 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 CHFRQ96EP1 664 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 ZFYVE19Q96K21 471 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 TMEM87BQ96K49 555 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 PSMG3-AS1Q96PY0 264 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 HHIPQ96QV1 700 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 KCTD15Q96SI1 283 aaPredicted RBP5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 TMEM209Q96SK2 561 aa5.33□□□□□ -1.56
NPIPB4-219ENST00000543660 TEKT3Q9BXF9 490 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms