RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 KRT19P08727 400 aa19.62■□□□□ 0.73
COPS7A-215ENST00000543155 KRT7P08729 469 aa19.62■□□□□ 0.73
COPS7A-215ENST00000543155 KRT3P12035 628 aa19.62■□□□□ 0.73
COPS7A-215ENST00000543155 ETS1P14921 441 aa19.62■□□□□ 0.73
COPS7A-215ENST00000543155 PECAM1P16284 738 aaPredicted RBP19.62■□□□□ 0.73
COPS7A-215ENST00000543155 SLC25A11Q02978 314 aaKnown RBP19.62■□□□□ 0.73
COPS7A-215ENST00000543155 NR1H3Q13133 447 aa19.62■□□□□ 0.73
COPS7A-215ENST00000543155 SRRM1Q8IYB3 904 aaKnown RBP19.62■□□□□ 0.73
COPS7A-215ENST00000543155 FNIP1Q8TF40 1166 aa19.62■□□□□ 0.73
COPS7A-215ENST00000543155 HAUS1Q96CS2 278 aa19.62■□□□□ 0.73
COPS7A-215ENST00000543155 FRMD8P1Q9BZ68 369 aaPredicted RBP19.62■□□□□ 0.73
COPS7A-215ENST00000543155 NKIRAS1Q9NYS0 192 aa19.62■□□□□ 0.73
COPS7A-215ENST00000543155 SHOC2Q9UQ13 582 aa19.62■□□□□ 0.73
COPS7A-215ENST00000543155 EXOC1LA0A1B0GW35 172 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 HBP1O60381 514 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 GJB1P08034 283 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 CXCL8P10145 99 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 RFC1P35251 1148 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 RAP1GAPP47736 663 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 GSCP56915 257 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 MKRN3Q13064 507 aaKnown RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 MPP2Q14168 576 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 KCTD2Q14681 263 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 TMED2Q15363 201 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 HADHQ16836 314 aaKnown RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 RNASEH2BQ5TBB1 312 aaKnown RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 EFCAB12Q6NXP0 572 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 PPP1R21Q6ZMI0 780 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 FBXO16Q8IX29 292 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 SLC35B2Q8TB61 432 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 ZNF668Q96K58 619 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 MMP19Q99542 508 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 KLC4Q9NSK0 619 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 FGFR1OP2Q9NVK5 253 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 WDR35Q9P2L0 1181 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 AGTPBP1Q9UPW5 1226 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 USP15Q9Y4E8 981 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 DNAJC25-GNG10A0A024R161 153 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 ADM5C9JUS6 153 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 SGK1O00141 431 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 CXCL11O14625 94 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 STX2P32856 288 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 PSMC1P62191 440 aaKnown RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 CCDC142Q17RM4 750 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 CCDC62Q6P9F0 684 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 TRPM8Q7Z2W7 1104 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 CDR2LQ86X02 465 aaPredicted RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 ERO1BQ86YB8 467 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 TDRPQ86YL5 185 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 JOSD2Q8TAC2 188 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 DCPSQ96C86 337 aaKnown RBP19.61■□□□□ 0.73
COPS7A-215ENST00000543155 CYTH4Q9UIA0 394 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 SIX4Q9UIU6 781 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 SLC12A4Q9UP95 1085 aa19.61■□□□□ 0.73
COPS7A-215ENST00000543155 LRCH4O75427 683 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 CLCN3P51790 818 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 RAD23BP54727 409 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 PLCB3Q01970 1234 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 XRCC4Q13426 336 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 WDR72Q3MJ13 1102 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 SULF1Q8IWU6 871 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 TTC13Q8NBP0 860 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 GDAP1Q8TB36 358 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 MAML1Q92585 1016 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 TMEM121Q9BTD3 319 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 NFKBIZQ9BYH8 718 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 ZWILCHQ9H900 591 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 MLXIPLQ9NP71 852 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 PRMT7Q9NVM4 692 aaPredicted RBP19.6■□□□□ 0.73
COPS7A-215ENST00000543155 RASA4BC9J798 803 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 RASA4O43374 803 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 GH1P01241 217 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 NUGGCQ68CJ6 796 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 CENPUQ71F23 418 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 PCGF5Q86SE9 256 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 TMEM192Q8IY95 271 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 NLGN2Q8NFZ4 835 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 MAGEB18Q96M61 343 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 MINDY3Q9H8M7 445 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 TXNRD2Q9NNW7 524 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 UBN1Q9NPG3 1134 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 HAUS2Q9NVX0 235 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.6■□□□□ 0.73
COPS7A-215ENST00000543155 MCM3APO60318 1980 aa19.6■□□□□ 0.73
COPS7A-215ENST00000543155 SUN1O94901 812 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 NFICP08651 508 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 TXNP10599 105 aaKnown RBP19.59■□□□□ 0.73
COPS7A-215ENST00000543155 GCAP28676 217 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 PHKA2P46019 1235 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 SF3A3Q12874 501 aaKnown RBP eCLIP19.59■□□□□ 0.73
COPS7A-215ENST00000543155 TMEM63BQ5T3F8 832 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 XYLT1Q86Y38 959 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 C1orf127Q8N9H9 656 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 PRCCQ92733 491 aaPredicted RBP19.59■□□□□ 0.73
COPS7A-215ENST00000543155 COPS5Q92905 334 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 SGSM3Q96HU1 749 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 TGS1Q96RS0 853 aaKnown RBP19.59■□□□□ 0.73
COPS7A-215ENST00000543155 SDCBP2Q9H190 292 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 SYNCQ9H7C4 482 aa19.59■□□□□ 0.73
COPS7A-215ENST00000543155 PPCSQ9HAB8 311 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms