RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 GCNT3O95395 438 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 LDHAP00338 332 aaKnown RBP27.94■■■□□ 2.06
PDCD2-209ENST00000542896 ITGB3P05106 788 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 CSH1P0DML2 217 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 CSH2P0DML3 217 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 RUNX3Q13761 415 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 WDR5BQ86VZ2 330 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 PDCL2Q8N4E4 241 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 FAM83CQ9BQN1 747 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 KIF9Q9HAQ2 790 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 FBXO2Q9UK22 296 aaPredicted RBP27.94■■■□□ 2.06
PDCD2-209ENST00000542896 CCL26Q9Y258 94 aa27.94■■■□□ 2.06
PDCD2-209ENST00000542896 SCN1AP35498 2009 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.93■■■□□ 2.06
PDCD2-209ENST00000542896 HUS1O60921 280 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 HOXA6P31267 233 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 WNT7BP56706 349 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 CSRP2Q16527 193 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 TXNDC8Q6A555 127 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 CC2D1AQ6P1N0 951 aaPredicted RBP27.93■■■□□ 2.06
PDCD2-209ENST00000542896 PRR23CQ6ZRP0 262 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 SYCP3Q8IZU3 236 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 STKLD1Q8NE28 680 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 ZSWIM2Q8NEG5 633 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 USP13Q92995 863 aaPredicted RBP27.93■■■□□ 2.06
PDCD2-209ENST00000542896 DNAJC19Q96DA6 116 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 EBF3Q9H4W6 596 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 HPS4Q9NQG7 708 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 TDP1Q9NUW8 608 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 DDX43Q9NXZ2 648 aaKnown RBP27.93■■■□□ 2.06
PDCD2-209ENST00000542896 RBAKQ9NYW8 714 aaPredicted RBP27.93■■■□□ 2.06
PDCD2-209ENST00000542896 L1RE1Q9UN81 338 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 PCDHB13Q9Y5F0 798 aa27.93■■■□□ 2.06
PDCD2-209ENST00000542896 SRPRBQ9Y5M8 271 aaKnown RBP27.93■■■□□ 2.06
PDCD2-209ENST00000542896 IDEP14735 1019 aa27.92■■■□□ 2.06
PDCD2-209ENST00000542896 PDCP20941 246 aa27.92■■■□□ 2.06
PDCD2-209ENST00000542896 MYL7Q01449 175 aa27.92■■■□□ 2.06
PDCD2-209ENST00000542896 GRSF1Q12849 480 aaKnown RBP eCLIP27.92■■■□□ 2.06
PDCD2-209ENST00000542896 SDHAF4Q5VUM1 108 aa27.92■■■□□ 2.06
PDCD2-209ENST00000542896 TRIM68Q6AZZ1 485 aa27.92■■■□□ 2.06
PDCD2-209ENST00000542896 C1orf127Q8N9H9 656 aa27.92■■■□□ 2.06
PDCD2-209ENST00000542896 NOC3LQ8WTT2 800 aaKnown RBP27.92■■■□□ 2.06
PDCD2-209ENST00000542896 LEO1Q8WVC0 666 aaPredicted RBP27.92■■■□□ 2.06
PDCD2-209ENST00000542896 CLIC6Q96NY7 704 aa27.92■■■□□ 2.06
PDCD2-209ENST00000542896 ACBD6Q9BR61 282 aa27.92■■■□□ 2.06
PDCD2-209ENST00000542896 SLC30A4O14863 429 aa27.91■■■□□ 2.06
PDCD2-209ENST00000542896 EXTL3O43909 919 aa27.91■■■□□ 2.06
PDCD2-209ENST00000542896 GARTP22102 1010 aa27.91■■■□□ 2.06
PDCD2-209ENST00000542896 HOXC13P31276 330 aa27.91■■■□□ 2.06
PDCD2-209ENST00000542896 RPL10AP62906 217 aaKnown RBP27.91■■■□□ 2.06
PDCD2-209ENST00000542896 AMPD2Q01433 879 aa27.91■■■□□ 2.06
PDCD2-209ENST00000542896 MON1AQ86VX9 555 aa27.91■■■□□ 2.06
PDCD2-209ENST00000542896 TMEM86AQ8N2M4 240 aa27.91■■■□□ 2.06
PDCD2-209ENST00000542896 FAM160A2Q8N612 972 aaPredicted RBP27.91■■■□□ 2.06
PDCD2-209ENST00000542896 CSGALNACT2Q8N6G5 542 aa27.91■■■□□ 2.06
PDCD2-209ENST00000542896 LRRC52Q8N7C0 313 aa27.91■■■□□ 2.06
PDCD2-209ENST00000542896 UXTQ9UBK9 157 aaPredicted RBP27.91■■■□□ 2.06
PDCD2-209ENST00000542896 ANK1P16157 1881 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 GOLGA8IPA6NC78 632 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 GOLGA8JA6NMD2 632 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 SOBPA7XYQ1 873 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 ATG13O75143 517 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 KRT19P08727 400 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 ACAT1P24752 427 aaKnown RBP27.9■■■□□ 2.06
PDCD2-209ENST00000542896 CEBPZQ03701 1054 aaKnown RBP27.9■■■□□ 2.06
PDCD2-209ENST00000542896 DDR2Q16832 855 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 TMEM196Q5HYL7 178 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 INTS6LQ5JSJ4 861 aaKnown RBP27.9■■■□□ 2.06
PDCD2-209ENST00000542896 FSTL4Q6MZW2 842 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 ABCB6Q9NP58 842 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 OLFML3Q9NRN5 406 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 ITGA11Q9UKX5 1188 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 SLC8A2Q9UPR5 921 aa27.9■■■□□ 2.06
PDCD2-209ENST00000542896 TRDMT1O14717 391 aaKnown RBP27.89■■■□□ 2.06
PDCD2-209ENST00000542896 CYP2F1P24903 491 aa27.89■■■□□ 2.06
PDCD2-209ENST00000542896 CASP5P51878 434 aa27.89■■■□□ 2.06
PDCD2-209ENST00000542896 ALCAMQ13740 583 aa27.89■■■□□ 2.06
PDCD2-209ENST00000542896 PKN3Q6P5Z2 889 aa27.89■■■□□ 2.06
PDCD2-209ENST00000542896 CCDC73Q6ZRK6 1079 aa27.89■■■□□ 2.06
PDCD2-209ENST00000542896 CNTNAP3BQ96NU0 1288 aa27.89■■■□□ 2.06
PDCD2-209ENST00000542896 CNTNAP3Q9BZ76 1288 aa27.89■■■□□ 2.06
PDCD2-209ENST00000542896 GTF3C4Q9UKN8 822 aa27.89■■■□□ 2.06
PDCD2-209ENST00000542896 SNX9Q9Y5X1 595 aa27.89■■■□□ 2.06
PDCD2-209ENST00000542896 OTOL1A6NHN0 477 aaPredicted RBP27.88■■■□□ 2.05
PDCD2-209ENST00000542896 FOXD2O60548 495 aaPredicted RBP27.88■■■□□ 2.05
PDCD2-209ENST00000542896 ARSAP15289 507 aa27.88■■■□□ 2.05
PDCD2-209ENST00000542896 PXNP49023 591 aaPredicted RBP27.88■■■□□ 2.05
PDCD2-209ENST00000542896 RBP5P82980 135 aa27.88■■■□□ 2.05
PDCD2-209ENST00000542896 CUL4AQ13619 759 aa27.88■■■□□ 2.05
PDCD2-209ENST00000542896 ZNF268Q14587 947 aaPredicted RBP27.88■■■□□ 2.05
PDCD2-209ENST00000542896 FAM173BQ6P4H8 233 aa27.88■■■□□ 2.05
PDCD2-209ENST00000542896 SPATA2LQ8IUW3 424 aaPredicted RBP27.88■■■□□ 2.05
PDCD2-209ENST00000542896 FAM84AQ96KN4 292 aa27.88■■■□□ 2.05
PDCD2-209ENST00000542896 CBWD1Q9BRT8 395 aa27.88■■■□□ 2.05
PDCD2-209ENST00000542896 PCIF1Q9H4Z3 704 aa27.88■■■□□ 2.05
PDCD2-209ENST00000542896 TRPC7Q9HCX4 862 aa27.88■■■□□ 2.05
PDCD2-209ENST00000542896 R3HCC1Q9Y3T6 440 aaKnown RBP27.88■■■□□ 2.05
PDCD2-209ENST00000542896 NCOR2Q9Y618 2525 aa27.88■■■□□ 2.05
PDCD2-209ENST00000542896 NOL4O94818 638 aa27.87■■■□□ 2.05
PDCD2-209ENST00000542896 TMEM191BP0C7N4 346 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms