RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 PTPN1P18031 435 aaKnown RBP11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 OR1D2P34982 312 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 CLCN4P51793 760 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 GOLGA8FQ08AF8 430 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 GOLGA8DPQ0D2H9 430 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 GPR17Q13304 367 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 SMC1AQ14683 1233 aaKnown RBP11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 SMYD5Q6GMV2 418 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 ZNF280DQ6N043 979 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 PDXDC1Q6P996 788 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 TMEM270Q6UE05 265 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 RNF19BQ6ZMZ0 732 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 METTL23Q86XA0 190 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 GPIHBP1Q8IV16 184 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 FUKQ8N0W3 1084 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 TTC9BQ8N6N2 239 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 RBBP8NLQ8NC74 664 aaPredicted RBP11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 B3GALNT2Q8NCR0 500 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 NEK11Q8NG66 645 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 MYCBPAPQ8TBZ2 947 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 TMEM176AQ96HP8 235 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 PKNOX2Q96KN3 472 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 SYT15Q9BQS2 421 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 NT5C1AQ9BXI3 368 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 B3GNT5Q9BYG0 378 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 EDEM3Q9BZQ6 932 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 ENTPD7Q9NQZ7 604 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 NOCTQ9UK39 431 aaKnown RBP11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 CDH9Q9ULB4 789 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 PCDHB4Q9Y5E5 795 aa11.37□□□□□ -0.59
NPIPB3-210ENST00000542817 ARHGEF37A1IGU5 675 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 MTMR11A4FU01 709 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 LRRC53A6NM62 1247 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 H7C4K7 107 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 CLDN5O00501 218 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 PER2O15055 1255 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 TGM5O43548 720 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 TRIM21P19474 475 aaKnown RBP11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 PCSK1P29120 753 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 CDC25BP30305 580 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 CASP14P31944 242 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 SOX5P35711 763 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 RAPGEF1Q13905 1077 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 COL19A1Q14993 1142 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 DUSP6Q16828 381 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 PKDCCQ504Y2 493 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 MDH1BQ5I0G3 518 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 HGSNATQ68CP4 663 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 PDE12Q6L8Q7 609 aaKnown RBP11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 KIAA1841Q6NSI8 718 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 TMC6Q7Z403 805 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 GLYCTKQ8IVS8 523 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 ATAD1Q8NBU5 361 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 ZMIZ2Q8NF64 920 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 MYLPFQ96A32 169 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 PCED1BQ96HM7 432 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 FAM81BQ96LP2 452 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 RHOBTB2Q9BYZ6 727 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 SNX25Q9H3E2 840 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 AIPL1Q9NZN9 384 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 LMCD1Q9NZU5 365 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 DAAM1Q9Y4D1 1078 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 PLXNA3P51805 1871 aa11.36□□□□□ -0.59
NPIPB3-210ENST00000542817 ESPNB1AK53 854 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 O00370 1275 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 GFPT2O94808 682 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 PAPLNO95428 1278 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 GLP2RO95838 553 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 PAEPP09466 180 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 CCDC130P13994 396 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 ATF2P15336 505 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 EPCAMP16422 314 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 CHRNB2P17787 502 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 BRD2P25440 801 aaKnown RBP11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 HNRNPH3P31942 346 aaKnown RBP11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 NDUFV1P49821 464 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 HYAL1Q12794 435 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 SLC39A12Q504Y0 691 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 TCEAL5Q5H9L2 206 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 ARHGAP17Q68EM7 881 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 WDR59Q6PJI9 974 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 NOP9Q86U38 636 aaKnown RBP11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 TTC30AQ86WT1 665 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 PALB2Q86YC2 1186 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 THEM5Q8N1Q8 247 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 TTC39CQ8N584 583 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 WDTC1Q8N5D0 677 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 TC2NQ8N9U0 490 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 PCMTD1Q96MG8 357 aaPredicted RBP11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 PGLYRP2Q96PD5 576 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 DNAJC7Q99615 494 aa11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 CDX2Q99626 313 aaPredicted RBP11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 HNRNPABQ99729 332 aaKnown RBP11.35□□□□□ -0.59
NPIPB3-210ENST00000542817 NUP58Q9BVL2 599 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms