RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SLC22A17Q8WUG5 538 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 HDAC7Q8WUI4 952 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 ARNTL2Q8WYA1 636 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 RIN2Q8WYP3 895 aaPredicted RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 DDX1Q92499 740 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 MRPL38Q96DV4 380 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CYFIP2Q96F07 1278 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 FUBP3Q96I24 572 aaKnown RBP eCLIP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 B3GALT6Q96L58 329 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 PCMTD1Q96MG8 357 aaPredicted RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 TMEM209Q96SK2 561 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 DNAJC7Q99615 494 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 HNRNPABQ99729 332 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 TCF25Q9BQ70 676 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 ZSWIM1Q9BR11 485 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 DNAI2Q9GZS0 605 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 SNX25Q9H3E2 840 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CERS4Q9HA82 394 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CSNK1G1Q9HCP0 422 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CRTAC1Q9NQ79 661 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 GTF3C4Q9UKN8 822 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 PCDHGC3Q9UN70 934 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 PCDHB4Q9Y5E5 795 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 BZW2Q9Y6E2 419 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 TSC2P49815 1807 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 WDR27A2RRH5 827 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 LRRC53A6NM62 1247 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 HIDE1A8MVS5 230 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 AKR1B15C9JRZ8 316 aaPredicted RBP6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CYP26A1O43174 497 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 ADAM12O43184 909 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 HCRTO43612 131 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CLASP2O75122 1294 aaKnown RBP6.24□□□□□ -1.41
ABCF1-207ENST00000542772 VNN2O95498 520 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 URODP06132 367 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CYP11B1P15538 503 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CHRNB2P17787 502 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CD58P19256 250 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CDH5P33151 784 aaPredicted RBP6.24□□□□□ -1.41
ABCF1-207ENST00000542772 GPD2P43304 727 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 MAGEA11P43364 429 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 NDUFV1P49821 464 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CLCN4P51793 760 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 RAPGEF1Q13905 1077 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 GRIN2CQ14957 1233 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 COL19A1Q14993 1142 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 STILQ15468 1287 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 PTPROQ16827 1216 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 ASTE1Q2TB18 679 aaPredicted RBP6.24□□□□□ -1.41
ABCF1-207ENST00000542772 ZNF394Q53GI3 561 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 SGO2Q562F6 1265 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 PPP1R26Q5T8A7 1209 aaPredicted RBP6.24□□□□□ -1.41
ABCF1-207ENST00000542772 SFMBT2Q5VUG0 894 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 VSTM1Q6UX27 236 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 RNF19BQ6ZMZ0 732 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 TMC6Q7Z403 805 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 ACOT1Q86TX2 421 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 SLC47A2Q86VL8 602 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 PPFIBP1Q86W92 1011 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CNGA4Q8IV77 575 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 TCEAL8Q8IYN2 117 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 FUKQ8N0W3 1084 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 WDTC1Q8N5D0 677 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 C12orf29Q8N999 325 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 ANKRD52Q8NB46 1076 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 RBBP8NLQ8NC74 664 aaPredicted RBP6.24□□□□□ -1.41
ABCF1-207ENST00000542772 B3GALNT2Q8NCR0 500 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 SLC30A5Q8TAD4 765 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 OLIG1Q8TAK6 271 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 SPPL2BQ8TCT7 592 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 MICAL1Q8TDZ2 1067 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 SLC35F5Q8WV83 523 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CPLX3Q8WVH0 158 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 TFAP2BQ92481 460 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 PCED1BQ96HM7 432 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 LRCH3Q96II8 777 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CEP295NLQ96MC4 621 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 HEXIM2Q96MH2 286 aaKnown RBP6.24□□□□□ -1.41
ABCF1-207ENST00000542772 SPAG5Q96R06 1193 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 PPP1R9BQ96SB3 815 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 LPIN3Q9BQK8 851 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 SYT15Q9BQS2 421 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 EMILIN2Q9BXX0 1053 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 B3GNT5Q9BYG0 378 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 LHX5Q9H2C1 402 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 DPEP3Q9H4B8 488 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 PLEKHA4Q9H4M7 779 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 ABCB6Q9NP58 842 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 TMLHEQ9NVH6 421 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 IL37Q9NZH6 218 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 HMGXB4Q9UGU5 601 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 AFF4Q9UHB7 1163 aaKnown RBP6.24□□□□□ -1.41
ABCF1-207ENST00000542772 NOCTQ9UK39 431 aaKnown RBP6.24□□□□□ -1.41
ABCF1-207ENST00000542772 MTUS1Q9ULD2 1270 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 MTCH2Q9Y6C9 303 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 CDY1Q9Y6F8 540 aa6.24□□□□□ -1.41
ABCF1-207ENST00000542772 PTPRDP23468 1912 aa6.23□□□□□ -1.41
ABCF1-207ENST00000542772 ATG2AQ2TAZ0 1938 aa6.23□□□□□ -1.41
ABCF1-207ENST00000542772 SSU72P8A0A1W2PR75 194 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms