RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 KCNA10Q16322 511 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 HEATR6Q6AI08 1181 aaKnown RBP10.66□□□□□ -0.7
TOP3A-208ENST00000542570 RAPH1Q70E73 1250 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 SLC13A5Q86YT5 568 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-208ENST00000542570 PCSK9Q8NBP7 692 aaKnown RBP10.66□□□□□ -0.7
TOP3A-208ENST00000542570 FAM172AQ8WUF8 416 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 PABPC5Q96DU9 382 aaKnown RBP10.66□□□□□ -0.7
TOP3A-208ENST00000542570 ZIC5Q96T25 663 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 ZSWIM1Q9BR11 485 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 KRT82Q9NSB4 513 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 FAM8A1Q9UBU6 413 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 PCDHB7Q9Y5E2 793 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 BDNFP23560 247 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 SARNPP82979 210 aaKnown RBP10.66□□□□□ -0.7
TOP3A-208ENST00000542570 LMNB2Q03252 620 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 SV2CQ496J9 727 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 EFHC2Q5JST6 749 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 CFAP157Q5JU67 520 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 OLFML2BQ68BL8 750 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 MICALCLQ6ZW33 695 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 PLPPR4Q7Z2D5 763 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 FAM71BQ8TC56 605 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 FBXO25Q8TCJ0 367 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 SKA2Q8WVK7 121 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-208ENST00000542570 SCYL1Q96KG9 808 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 UBP1Q9NZI7 540 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 SSX2IPQ9Y2D8 614 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 NRCAMQ92823 1304 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 MYH3P11055 1940 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 GTPBP10A4D1E9 387 aaKnown RBP10.65□□□□□ -0.7
TOP3A-208ENST00000542570 PRRG1O14668 218 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 NDC80O14777 642 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 ATP4AP20648 1035 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 ETFBP38117 255 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 MSH2P43246 934 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 ALDH7A1P49419 539 aaKnown RBP10.65□□□□□ -0.7
TOP3A-208ENST00000542570 PMS2P54278 862 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 TSTA3Q13630 321 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-208ENST00000542570 CLEC16AQ2KHT3 1053 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 ANKS4BQ8N8V4 417 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 PGBD4Q96DM1 585 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 RNF39Q9H2S5 420 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 CDHR5Q9HBB8 845 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 GGT7Q9UJ14 662 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 XIRP1Q702N8 1843 aaKnown RBP10.65□□□□□ -0.7
TOP3A-208ENST00000542570 PODXLO00592 558 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 ZSCAN5DPP0CG00 497 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 HSPA6P17066 643 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 NR1D1P20393 614 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 EPHB2P29323 1055 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 CHRNA3P32297 505 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 FMO1Q01740 532 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 GUCY1A3Q02108 690 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 ADIGQ0VDE8 80 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 TRIM32Q13049 653 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 BYSLQ13895 437 aaKnown RBP10.65□□□□□ -0.7
TOP3A-208ENST00000542570 SLMAPQ14BN4 828 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 HGSNATQ68CP4 663 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 EMBQ6PCB8 327 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 PLEKHO2Q8TD55 490 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 FBF1Q8TES7 1133 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 CASKIN2Q8WXE0 1202 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 SOCS4Q8WXH5 440 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 CFAP57Q96MR6 1250 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 RILPQ96NA2 401 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 SLC13A1Q9BZW2 595 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 ARHGAP28Q9P2N2 729 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 GABRQQ9UN88 632 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 PCDHA2Q9Y5H9 948 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 LTBP3Q9NS15 1303 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 TBKBP1A7MCY6 615 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 MCF2P10911 925 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 GPD1P21695 349 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 SNRPFP62306 86 aaKnown RBP10.65□□□□□ -0.7
TOP3A-208ENST00000542570 CDK17Q00537 523 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 PCSK7Q16549 785 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 IL31Q6EBC2 164 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 VSIG1Q86XK7 387 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 APBA2Q99767 749 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 NSRP1Q9H0G5 558 aaKnown RBP10.65□□□□□ -0.7
TOP3A-208ENST00000542570 SUDS3Q9H7L9 328 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-208ENST00000542570 SMPD4Q9NXE4 827 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 SLC12A6Q9UHW9 1150 aa10.65□□□□□ -0.7
TOP3A-208ENST00000542570 MICAL2O94851 1124 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 CFHP08603 1231 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 OR4Q2P0C623 313 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 FAM153BP0C7A2 387 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 ZNF131P52739 623 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 CDC42EP1Q00587 391 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 NFIL3Q16649 462 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 DCAF4L1Q3SXM0 396 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 FAM153CQ494X1 144 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 MEI1Q5TIA1 1274 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 FAM171A1Q5VUB5 890 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 MFSD7Q6UXD7 560 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 ANKRD23Q86SG2 305 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 ATL2Q8NHH9 583 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 PPTC7Q8NI37 304 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 PWWP2AQ96N64 755 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms