RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 SPATA2LQ8IUW3 424 aaPredicted RBP21.71■■□□□ 1.07
DDB1-220ENST00000542337 OR5B17Q8NGF7 314 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 CLDN23Q96B33 292 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 MSANTD3Q96H12 275 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 THG1LQ9NWX6 298 aaKnown RBP21.71■■□□□ 1.07
DDB1-220ENST00000542337 USP25Q9UHP3 1055 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 SERTAD1Q9UHV2 236 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 FBXO4Q9UKT5 387 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 NDRG2Q9UN36 371 aaKnown RBP21.71■■□□□ 1.07
DDB1-220ENST00000542337 SCN1AP35498 2009 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 ANK1P16157 1881 aa21.71■■□□□ 1.07
DDB1-220ENST00000542337 ACAT1P24752 427 aaKnown RBP21.7■■□□□ 1.06
DDB1-220ENST00000542337 DDX6P26196 483 aaKnown RBP eCLIP21.7■■□□□ 1.06
DDB1-220ENST00000542337 WEE1P30291 646 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 KPNA1P52294 538 aaPredicted RBP21.7■■□□□ 1.06
DDB1-220ENST00000542337 MLLT6P55198 1093 aaPredicted RBP21.7■■□□□ 1.06
DDB1-220ENST00000542337 EHHADHQ08426 723 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 PSMD6Q15008 389 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 KNOP1Q1ED39 458 aaKnown RBP21.7■■□□□ 1.06
DDB1-220ENST00000542337 BMT2Q1RMZ1 405 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 ARHGAP29Q52LW3 1261 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 TRAPPC11Q7Z392 1133 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 GPIHBP1Q8IV16 184 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 CCDC127Q96BQ5 260 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 FAM84AQ96KN4 292 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 SPATA32Q96LK8 384 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 MMS19Q96T76 1030 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 C8orf33Q9H7E9 229 aaPredicted RBP21.7■■□□□ 1.06
DDB1-220ENST00000542337 EXOC1Q9NV70 894 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 TMLHEQ9NVH6 421 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 UXTQ9UBK9 157 aaPredicted RBP21.7■■□□□ 1.06
DDB1-220ENST00000542337 GTF3C4Q9UKN8 822 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 MAGED2Q9UNF1 606 aaPredicted RBP21.7■■□□□ 1.06
DDB1-220ENST00000542337 ATP6V1DQ9Y5K8 247 aa21.7■■□□□ 1.06
DDB1-220ENST00000542337 GABRDO14764 452 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 EXOC3O60645 756 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 LMNAP02545 664 aaKnown RBP21.69■■□□□ 1.06
DDB1-220ENST00000542337 CMA1P23946 247 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 CYP4F8P98187 520 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 PLCB2Q00722 1185 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 CYP24A1Q07973 514 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 FCHO2Q0JRZ9 810 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 PSMD2Q13200 908 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 TRPC3Q13507 836 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 MAPRE1Q15691 268 aaKnown RBP21.69■■□□□ 1.06
DDB1-220ENST00000542337 SOWAHAQ2M3V2 549 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 C4orf50Q6ZRC1 276 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 MRPS31Q92665 395 aaKnown RBP21.69■■□□□ 1.06
DDB1-220ENST00000542337 PAGE5Q96GU1 130 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 FUBP3Q96I24 572 aaKnown RBP eCLIP21.69■■□□□ 1.06
DDB1-220ENST00000542337 CGRRF1Q99675 332 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 IL21Q9HBE4 155 aa21.69■■□□□ 1.06
DDB1-220ENST00000542337 SOBPA7XYQ1 873 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 CYP2F1P24903 491 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 AVPR1AP37288 418 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 CSTF1Q05048 431 aaKnown RBP21.68■■□□□ 1.06
DDB1-220ENST00000542337 ZNF528Q3MIS6 628 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 OSTM1Q86WC4 334 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 C12orf56Q8IXR9 622 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 GRAMD1CQ8IYS0 662 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 CELF5Q8N6W0 485 aaKnown RBP21.68■■□□□ 1.06
DDB1-220ENST00000542337 BPIFB1Q8TDL5 484 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 CCDC47Q96A33 483 aaKnown RBP21.68■■□□□ 1.06
DDB1-220ENST00000542337 RSPRY1Q96DX4 576 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 MKNK1Q9BUB5 465 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 CDH9Q9ULB4 789 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 R4GN57 208 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 PTPRJQ12913 1337 aa21.68■■□□□ 1.06
DDB1-220ENST00000542337 PHACTR2O75167 634 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 MYL1P05976 194 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 CCNE1P24864 410 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 NLRP12P59046 1061 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 PPP2R5DQ14738 602 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 DDR2Q16832 855 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 CFAP221Q4G0U5 840 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 SCARA3Q6AZY7 606 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 SCN4BQ8IWT1 228 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 CMTM8Q8IZV2 173 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 ADSSL1Q8N142 457 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 SYT15Q9BQS2 421 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 IER2Q9BTL4 223 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 SLC46A2Q9BY10 475 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 SNX25Q9H3E2 840 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 LMAN1LQ9HAT1 526 aa21.67■■□□□ 1.06
DDB1-220ENST00000542337 MAGEC2Q9UBF1 373 aaPredicted RBP21.67■■□□□ 1.06
DDB1-220ENST00000542337 A0A1B0GVL5 298 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 ARNTLO00327 626 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 ACTN4O43707 911 aaKnown RBP21.66■■□□□ 1.06
DDB1-220ENST00000542337 F11P03951 625 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 FAM163BP0C2L3 166 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 PFKFB1P16118 471 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 HMGA1P17096 107 aaKnown RBP21.66■■□□□ 1.06
DDB1-220ENST00000542337 WARSP23381 471 aaKnown RBP21.66■■□□□ 1.06
DDB1-220ENST00000542337 GPR15P49685 360 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 TNNC1P63316 161 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 FAM171BQ6P995 826 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 MAB21L3Q8N8X9 362 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 ATRIPQ8WXE1 791 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 USP34Q70CQ2 3546 aa21.66■■□□□ 1.06
DDB1-220ENST00000542337 TSC2P49815 1807 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms