RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 TTC23LQ6PF05 361 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 BTNL9Q6UXG8 535 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CCNI2Q6ZMN8 369 aaPredicted RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 Q6ZNX1 250 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 PIGOQ8TEQ8 1089 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 ATP13A3Q9H7F0 1226 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 PKD2L1Q9P0L9 805 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 FAF1Q9UNN5 650 aaPredicted RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 TRAV6A0A075B6T7 132 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CYP3A7-CYP3A51PA0A087WV96 503 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 PVALEFA0A1B0GWK0 134 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 RCCD1A6NED2 376 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 BACH1O14867 736 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 HSF2BPO75031 334 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 KRT16P08779 473 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 FECHP22830 423 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CYP3A7P24462 503 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 ZNF76P36508 570 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 SREBF1P36956 1147 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 MSH2P43246 934 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 DNM2P50570 870 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CYP27A1Q02318 531 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CLUL1Q15846 466 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 TAF12Q16514 161 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 FAM26FQ5R3K3 315 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 METTL11BQ5VVY1 283 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CYP4V2Q6ZWL3 525 aaPredicted RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 SLC22A8Q8TCC7 542 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CDKL2Q92772 493 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 MBOAT7Q96N66 472 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 FARSBQ9NSD9 589 aaKnown RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 TRIM33Q9UPN9 1127 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 PCP4L1A6NKN8 68 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 TRAPPC3O43617 180 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 KLHL41O60662 606 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 NDUFA10O95299 355 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CBX5P45973 191 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 PTDSS1P48651 473 aaKnown RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 SLC12A3P55017 1021 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 NAA20P61599 178 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 AP3B2Q13367 1082 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CTTNQ14247 550 aaKnown RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 KRT26Q7Z3Y9 468 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 GUF1Q8N442 669 aaKnown RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 PMEPA1Q969W9 287 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 PGBD4Q96DM1 585 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 IL20Q9NYY1 176 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 CAPN11Q9UMQ6 739 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 PCDHA2Q9Y5H9 948 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 EPN1Q9Y6I3 576 aaPredicted RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 DUSP10Q9Y6W6 482 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 HGSO14964 777 aaPredicted RBP11.65□□□□□ -0.54
CDH3-203ENST00000542274 FARP2O94887 1054 aaPredicted RBP11.65□□□□□ -0.54
CDH3-203ENST00000542274 KRT18P05783 430 aaKnown RBP11.65□□□□□ -0.54
CDH3-203ENST00000542274 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
CDH3-203ENST00000542274 RTP1P59025 263 aa11.65□□□□□ -0.54
CDH3-203ENST00000542274 HERVK_113P62684 666 aa11.65□□□□□ -0.54
CDH3-203ENST00000542274 METTL3Q86U44 580 aaKnown RBP11.65□□□□□ -0.54
CDH3-203ENST00000542274 CEP70Q8NHQ1 597 aa11.65□□□□□ -0.54
CDH3-203ENST00000542274 AENQ8WTP8 325 aaKnown RBP11.65□□□□□ -0.54
CDH3-203ENST00000542274 SCFD1Q8WVM8 642 aa11.65□□□□□ -0.54
CDH3-203ENST00000542274 NMD3Q96D46 503 aaKnown RBP11.65□□□□□ -0.54
CDH3-203ENST00000542274 STK33Q9BYT3 514 aa11.65□□□□□ -0.54
CDH3-203ENST00000542274 SH2D4AQ9H788 454 aa11.65□□□□□ -0.54
CDH3-203ENST00000542274 MTRF1LQ9UGC7 380 aaKnown RBP11.65□□□□□ -0.54
CDH3-203ENST00000542274 VAV3Q9UKW4 847 aa11.65□□□□□ -0.54
CDH3-203ENST00000542274 IGLV3-22A0A075B6J6 115 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 A0A1W2PQC6 194 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 TRAF5O00463 557 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 ENC1O14682 589 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 GUCY1B2O75343 617 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 PABPC1P11940 636 aaKnown RBP11.65□□□□□ -0.55
CDH3-203ENST00000542274 CALB2P22676 271 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 ADRM1Q16186 407 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 VWA3BQ502W6 1294 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 HYIQ5T013 277 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 DCAF15Q66K64 600 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 KSR1Q8IVT5 923 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 DNAJC7Q99615 494 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 MMRN2Q9H8L6 949 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 WDR6Q9NNW5 1121 aaKnown RBP11.65□□□□□ -0.55
CDH3-203ENST00000542274 HOMER2Q9NSB8 354 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 GPSM3Q9Y4H4 160 aa11.65□□□□□ -0.55
CDH3-203ENST00000542274 GTPBP10A4D1E9 387 aaKnown RBP11.64□□□□□ -0.55
CDH3-203ENST00000542274 DDX39AO00148 427 aaKnown RBP11.64□□□□□ -0.55
CDH3-203ENST00000542274 WFS1O76024 890 aa11.64□□□□□ -0.55
CDH3-203ENST00000542274 CHEK2O96017 543 aa11.64□□□□□ -0.55
CDH3-203ENST00000542274 PFKPQ01813 784 aa11.64□□□□□ -0.55
CDH3-203ENST00000542274 ZCWPW2Q504Y3 356 aa11.64□□□□□ -0.55
CDH3-203ENST00000542274 GLE1Q53GS7 698 aaKnown RBP11.64□□□□□ -0.55
CDH3-203ENST00000542274 TRMT1LQ7Z2T5 733 aaKnown RBP11.64□□□□□ -0.55
CDH3-203ENST00000542274 GATAD2AQ86YP4 633 aa11.64□□□□□ -0.55
CDH3-203ENST00000542274 SCYL3Q8IZE3 742 aa11.64□□□□□ -0.55
CDH3-203ENST00000542274 CPXCR1Q8N123 301 aa11.64□□□□□ -0.55
CDH3-203ENST00000542274 GATA6Q92908 595 aa11.64□□□□□ -0.55
CDH3-203ENST00000542274 ARHGEF2Q92974 986 aaKnown RBP11.64□□□□□ -0.55
CDH3-203ENST00000542274 CCDC51Q96ER9 411 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms