RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 MFAP3P55082 362 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 CUL2Q13617 745 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 PTPN14Q15678 1187 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 DCAF4L1Q3SXM0 396 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 USP37Q86T82 979 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 RTN4RL1Q86UN2 441 aaPredicted RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 RPUSD2Q8IZ73 545 aaKnown RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 DEPDC4Q8N2C3 294 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 SHC3Q92529 594 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 PAWRQ96IZ0 340 aaKnown RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 TWNKQ96RR1 684 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 MMS19Q96T76 1030 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 PCDHB18PQ96TA0 734 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 GPAMQ9HCL2 828 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ERVK-5Q9HDB9 667 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 DNAI1Q9UI46 699 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 OGDHLQ9ULD0 1010 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 PCDHB4Q9Y5E5 795 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 PCDHA13Q9Y5I0 950 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 TANC1Q9C0D5 1861 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 XIRP2A4UGR9 3374 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ENC1O14682 589 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 P4HA2O15460 535 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 B4GALT3O60512 393 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 CABYRO75952 493 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 IL18RAPO95256 599 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 MOCS3O95396 460 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 CHRNB2P17787 502 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 ACO1P21399 889 aaKnown RBP8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 SCP2P22307 547 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 GTF2H1P32780 548 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 CDK7P50613 346 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 DNA2P51530 1060 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 YARSP54577 528 aaKnown RBP8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 TLE2Q04725 743 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 BMS1Q14692 1282 aaKnown RBP8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 KCTD19Q17RG1 926 aaPredicted RBP8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 ARHGAP29Q52LW3 1261 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 CCDC122Q5T0U0 273 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 SLC43A3Q8NBI5 491 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 GSTCDQ8NEC7 633 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 RHBDD1Q8TEB9 315 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 WHAMMQ8TF30 809 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 JAKMIP2Q96AA8 810 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 ZSWIM1Q9BR11 485 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 WNT8AQ9H1J5 351 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 CAPN6Q9Y6Q1 641 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 ALPK3Q96L96 1907 aa8.25□□□□□ -1.09
AC005840.3-201ENST00000541888 CHD9Q3L8U1 2897 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ARL5CA6NH57 179 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 EIF3CLB5ME19 914 aaKnown RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 SLU7O95391 586 aaKnown RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 THBS1P07996 1170 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 CYP11B1P15538 503 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ITGB8P26012 769 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 CYLC1P35663 651 aaPredicted RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 GNG11P61952 73 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 FAAP100Q0VG06 881 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 SPA17Q15506 151 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 LRRC26Q2I0M4 334 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ZNF569Q5MCW4 686 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ZNF385CQ66K41 422 aaPredicted RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 FBXO46Q6PJ61 603 aaPredicted RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ALKAL1Q6UXT8 129 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 SLC39A5Q6ZMH5 540 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 LRRC8DQ7L1W4 858 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 FAM71AQ8IYT1 594 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 SLC35F6Q8N357 371 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 RBBP8NLQ8NC74 664 aaPredicted RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 C3orf58Q8NDZ4 430 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 DBF4BQ8NFT6 615 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 CPA5Q8WXQ8 436 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 HPDLQ96IR7 371 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 PSMB7Q99436 277 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 EIF3CQ99613 913 aaKnown RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 NUCKS1Q9H1E3 243 aaKnown RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 PRDM5Q9NQX1 630 aaPredicted RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 CISHQ9NSE2 258 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 NAGPAQ9UK23 515 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 NOCTQ9UK39 431 aaKnown RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 FBXL5Q9UKA1 691 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 PACSIN2Q9UNF0 486 aaPredicted RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 HYOU1Q9Y4L1 999 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 NME7Q9Y5B8 376 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 TIMM13Q9Y5L4 95 aaPredicted RBP8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 PIK3R2O00459 728 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 GPR182O15218 404 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ZSCAN12O43309 604 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ATP8B1O43520 1251 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 GJB6O95452 261 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 CD4P01730 458 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ITGB1P05556 798 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 ITGA4P13612 1032 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 FERP16591 822 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 PBX3P40426 434 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 MAGEA1P43355 309 aa8.24□□□□□ -1.09
AC005840.3-201ENST00000541888 CLCNKBP51801 687 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms