RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 FBXO2Q9UK22 296 aaPredicted RBP16.07■□□□□ 0.16
ITM2C-208ENST00000541852 AGAP1Q9UPQ3 857 aa16.07■□□□□ 0.16
ITM2C-208ENST00000541852 NCANO14594 1321 aa16.07■□□□□ 0.16
ITM2C-208ENST00000541852 COL4A2P08572 1712 aa16.07■□□□□ 0.16
ITM2C-208ENST00000541852 NUP210Q8TEM1 1887 aaPredicted RBP16.07■□□□□ 0.16
ITM2C-208ENST00000541852 TCHHQ07283 1943 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 ANK1P16157 1881 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 TISP43B9A030 160 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 HMGA1P17096 107 aaKnown RBP16.06■□□□□ 0.16
ITM2C-208ENST00000541852 PCSK1P29120 753 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 SOX9P48436 509 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 MYO1EQ12965 1108 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 RUNX3Q13761 415 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 PON2Q15165 354 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 USP49Q70CQ1 688 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 GPIHBP1Q8IV16 184 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 CCDC65Q8IXS2 484 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 PDCL2Q8N4E4 241 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 FUBP3Q96I24 572 aaKnown RBP eCLIP16.06■□□□□ 0.16
ITM2C-208ENST00000541852 ZFYVE19Q96K21 471 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 CEP295NLQ96MC4 621 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 FAM83CQ9BQN1 747 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 PANK4Q9NVE7 773 aa16.06■□□□□ 0.16
ITM2C-208ENST00000541852 DDX43Q9NXZ2 648 aaKnown RBP16.06■□□□□ 0.16
ITM2C-208ENST00000541852 RBAKQ9NYW8 714 aaPredicted RBP16.06■□□□□ 0.16
ITM2C-208ENST00000541852 MED19A0JLT2 244 aaPredicted RBP16.05■□□□□ 0.16
ITM2C-208ENST00000541852 FRMD3A2A2Y4 597 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 CHURC1-FNTBB4DL54 471 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 K7ESF4 209 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 TRDMT1O14717 391 aaKnown RBP16.05■□□□□ 0.16
ITM2C-208ENST00000541852 HRO43593 1189 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 ITGB3P05106 788 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 IDEP14735 1019 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 POLR2BP30876 1174 aaKnown RBP16.05■□□□□ 0.16
ITM2C-208ENST00000541852 STAT6P42226 847 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 FNTBP49356 437 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 CYP4F8P98187 520 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 AMPD3Q01432 767 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 SLC39A14Q15043 492 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 CSRP2Q16527 193 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 FBXO43Q4G163 708 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 TXNDC11Q6PKC3 985 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 WDR5BQ86VZ2 330 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 TOP6BLQ8N6T0 577 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 MAB21L3Q8N8X9 362 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 C1orf127Q8N9H9 656 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 FSIP1Q8NA03 581 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 CCDC26Q8TAB7 109 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 NETO1Q8TDF5 533 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 TRMT2BQ96GJ1 504 aaKnown RBP16.05■□□□□ 0.16
ITM2C-208ENST00000541852 INTS4Q96HW7 963 aaKnown RBP16.05■□□□□ 0.16
ITM2C-208ENST00000541852 ANKRD36BP1Q96IX9 119 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 MYRFLQ96LU7 910 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 PI4K2AQ9BTU6 479 aa16.05■□□□□ 0.16
ITM2C-208ENST00000541852 RBM12Q9NTZ6 932 aaKnown RBP16.05■□□□□ 0.16
ITM2C-208ENST00000541852 PRAMEF12O95522 483 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 SYT1P21579 422 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 DRD1P21728 446 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 PDE6CP51160 858 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 TNK2Q07912 1038 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 KCNA1Q09470 495 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 SPEM2Q0P670 501 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 MAPRE1Q15691 268 aaKnown RBP16.04■□□□□ 0.16
ITM2C-208ENST00000541852 DUOXA2Q1HG44 320 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 CFAP221Q4G0U5 840 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 TMEM196Q5HYL7 178 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 INTS6LQ5JSJ4 861 aaKnown RBP16.04■□□□□ 0.16
ITM2C-208ENST00000541852 CEP68Q76N32 757 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 TMEM150AQ86TG1 271 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 CAMKK1Q8N5S9 505 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 TTC8Q8TAM2 541 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 DDX1Q92499 740 aaKnown RBP16.04■□□□□ 0.16
ITM2C-208ENST00000541852 USP13Q92995 863 aaPredicted RBP16.04■□□□□ 0.16
ITM2C-208ENST00000541852 LOXL4Q96JB6 756 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 CLIC6Q96NY7 704 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 EHD2Q9NZN4 543 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 TBC1D7Q9P0N9 293 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 L1RE1Q9UN81 338 aa16.04■□□□□ 0.16
ITM2C-208ENST00000541852 ZNF638Q14966 1978 aaKnown RBP16.04■□□□□ 0.16
ITM2C-208ENST00000541852 ZNF233A6NK53 670 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 TULP1O00294 542 aaPredicted RBP16.03■□□□□ 0.16
ITM2C-208ENST00000541852 GABRDO14764 452 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 NOL4O94818 638 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 KRT19P08727 400 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 FAM163BP0C2L3 166 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 TMEM191BP0C7N4 346 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 PFKLP17858 780 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 RESTQ13127 1097 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 NR1H3Q13133 447 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 TXNDC8Q6A555 127 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 C4orf50Q6ZRC1 276 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.03■□□□□ 0.16
ITM2C-208ENST00000541852 SPATA2LQ8IUW3 424 aaPredicted RBP16.03■□□□□ 0.16
ITM2C-208ENST00000541852 GPD1LQ8N335 351 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 SAAL1Q96ER3 474 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 CUEDC2Q9H467 287 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 PARD6AQ9NPB6 346 aa16.03■□□□□ 0.16
ITM2C-208ENST00000541852 MAGED2Q9UNF1 606 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms