RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 CCDC38Q502W7 563 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 HYIQ5T013 277 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 IZUMO3Q5VZ72 239 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 MAEAQ7L5Y9 396 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 SUGP1Q8IWZ8 645 aaKnown RBP6.14□□□□□ -1.43
CIT-211ENST00000541841 ZGPATQ8N5A5 531 aaKnown RBP6.14□□□□□ -1.43
CIT-211ENST00000541841 GPATCH11Q8N954 259 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 C1orf131Q8NDD1 294 aaKnown RBP6.14□□□□□ -1.43
CIT-211ENST00000541841 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.14□□□□□ -1.43
CIT-211ENST00000541841 IL17REQ8NFR9 667 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 PLBD2Q8NHP8 589 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 KLHDC4Q8TBB5 520 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 NRG4Q8WWG1 115 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 KAT5Q92993 513 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 TBATAQ96M53 351 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 C22orf23Q9BZE7 217 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 R3HDMLQ9H3Y0 253 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 TESQ9UGI8 421 aaKnown RBP6.14□□□□□ -1.43
CIT-211ENST00000541841 NR2E3Q9Y5X4 410 aa6.14□□□□□ -1.43
CIT-211ENST00000541841 J3KRW8 73 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 POMCP01189 267 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 MYF5P13349 255 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 IL2RBP14784 551 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 IL12RB1P42701 662 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 STT3AP46977 705 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 TOMM20Q15388 145 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 STRIP1Q5VSL9 837 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 ABHD17BQ5VST6 288 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 PPP4R3AQ6IN85 833 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 GGT6Q6P531 493 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 ADGRG3Q86Y34 549 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 DRC7Q8IY82 874 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 TBC1D20Q96BZ9 403 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 Q96MF0 132 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 ARMT1Q9H993 441 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 ATP6V0A4Q9HBG4 840 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 MOCS1Q9NZB8 636 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 STAP2Q9UGK3 403 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 STXBP5LQ9Y2K9 1186 aa6.13□□□□□ -1.43
CIT-211ENST00000541841 LRRFIP2Q9Y608 721 aaKnown RBP6.13□□□□□ -1.43
CIT-211ENST00000541841 TCRBV7S2A1N4TA0A589 114 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 SNX2O60749 519 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 AMY1AP04745 511 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 HSD3B1P14060 373 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 CXCR5P32302 372 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 DDIT3P35638 169 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 MPLP40238 635 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 MAP2K6P52564 334 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 CXADRP78310 365 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 KRTAP1-1Q07627 177 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 ZNF543Q08ER8 600 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 TBX2Q13207 712 aaPredicted RBP6.12□□□□□ -1.43
CIT-211ENST00000541841 IL10RAQ13651 578 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 BLMHQ13867 455 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 DACT2Q5SW24 774 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 FAM180AQ6UWF9 173 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 PRIMA1Q86XR5 153 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 CCDC89Q8N998 374 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 NACC2Q96BF6 587 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 APIPQ96GX9 242 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 COQ10AQ96MF6 247 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 ZMAT3Q9HA38 289 aaKnown RBP6.12□□□□□ -1.43
CIT-211ENST00000541841 TMEM140Q9NV12 185 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 PTGFRNQ9P2B2 879 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 FBXO2Q9UK22 296 aaPredicted RBP6.12□□□□□ -1.43
CIT-211ENST00000541841 NOX1Q9Y5S8 564 aa6.12□□□□□ -1.43
CIT-211ENST00000541841 CDHR4A6H8M9 788 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 POM121BA6NF01 834 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 MASP2O00187 686 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 NCAM2O15394 837 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 GPR32O75388 356 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 TECP42680 631 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 MXRA7P84157 204 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 ICA1Q05084 483 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 MGAT2Q10469 447 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 PPFIA1Q13136 1202 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 PMS2P11Q13670 270 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 HIBCHQ6NVY1 386 aaPredicted RBP6.11□□□□□ -1.43
CIT-211ENST00000541841 RSRC2Q7L4I2 434 aaKnown RBP6.11□□□□□ -1.43
CIT-211ENST00000541841 NGDNQ8NEJ9 315 aaKnown RBP6.11□□□□□ -1.43
CIT-211ENST00000541841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.11□□□□□ -1.43
CIT-211ENST00000541841 MARS2Q96GW9 593 aaKnown RBP6.11□□□□□ -1.43
CIT-211ENST00000541841 ZNF764Q96H86 408 aaPredicted RBP6.11□□□□□ -1.43
CIT-211ENST00000541841 BTBD1Q9H0C5 482 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 RNPEPQ9H4A4 650 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 STARD7Q9NQZ5 370 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 HDAC9Q9UKV0 1011 aa6.11□□□□□ -1.43
CIT-211ENST00000541841 SPATA31A6Q5VVP1 1343 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 POLR2AP24928 1970 aaKnown RBP6.1□□□□□ -1.43
CIT-211ENST00000541841 MGST3O14880 152 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 ENDOD1O94919 500 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 ZFPL1O95159 310 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 ESRRBO95718 433 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 GPANK1O95872 356 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 FTLP02792 175 aaPredicted RBP6.1□□□□□ -1.43
CIT-211ENST00000541841 TSHRP16473 764 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 GCSHP23434 173 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 RAB1AP62820 205 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 NOMO3P69849 1222 aa6.1□□□□□ -1.43
CIT-211ENST00000541841 MPP3Q13368 585 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms