RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 SLC35B2Q8TB61 432 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 MGARPQ8TDB4 240 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 NLRP4Q96MN2 994 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 NFKBIZQ9BYH8 718 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 INO80BQ9C086 356 aaPredicted RBP13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 CDT1Q9H211 546 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 PCDH9Q9HC56 1237 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 SLC40A1Q9NP59 571 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 CXCL11O14625 94 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 KRT3P12035 628 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 PECAM1P16284 738 aaPredicted RBP13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 PSMA2P25787 234 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 RFC1P35251 1148 aaPredicted RBP13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 IREB2P48200 963 aaKnown RBP13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 OSTNP61366 133 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 GPS1Q13098 491 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 NR1H3Q13133 447 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 XRCC4Q13426 336 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 ZNF667Q5HYK9 610 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 RNASEH2BQ5TBB1 312 aaKnown RBP13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 ICE2Q659A1 982 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 EFCAB12Q6NXP0 572 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 TDRPQ86YL5 185 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 TRAPPC12Q8WVT3 735 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 MAML1Q92585 1016 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 FRMD8P1Q9BZ68 369 aaPredicted RBP13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 RPF1Q9H9Y2 349 aaKnown RBP13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 WDR35Q9P2L0 1181 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 NXF1Q9UBU9 619 aaKnown RBP13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 CYTH4Q9UIA0 394 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 SIX4Q9UIU6 781 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 AGTPBP1Q9UPW5 1226 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 SHOC2Q9UQ13 582 aa13.97□□□□□ -0.17
PRKAB1-206ENST00000541640 FOXO6A8MYZ6 492 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 TCP11X1B4DZS4 312 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 GJB1P08034 283 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 KRT7P08729 469 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 CXCL8P10145 99 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 ETS1P14921 441 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 CD19P15391 556 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 RAD23BP54727 409 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 TAZQ16635 292 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 TMEM63BQ5T3F8 832 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 CYP4F22Q6NT55 531 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 DPY19L2Q6NUT2 758 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 ARHGEF18Q6ZSZ5 1173 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 ERO1BQ86YB8 467 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 ARFGAP1Q8N6T3 406 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 ANKRD42Q8N9B4 389 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 ACSF2Q96CM8 615 aaPredicted RBP13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 MINDY3Q9H8M7 445 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 TXNRD2Q9NNW7 524 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 TBK1Q9UHD2 729 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 SLC12A4Q9UP95 1085 aa13.96□□□□□ -0.17
PRKAB1-206ENST00000541640 ADM5C9JUS6 153 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 LRCH4O75427 683 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 GCAP28676 217 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 RAP1GAPP47736 663 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 CLCN3P51790 818 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 POU5F1BQ06416 359 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 MKRN3Q13064 507 aaKnown RBP13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 KCTD2Q14681 263 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 TMEM132AQ24JP5 1023 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 TRPM8Q7Z2W7 1104 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 FBXO16Q8IX29 292 aaPredicted RBP13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 SRRM1Q8IYB3 904 aaKnown RBP13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 JOSD2Q8TAC2 188 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 DCPSQ96C86 337 aaKnown RBP13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 MMP19Q99542 508 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 KLC4Q9NSK0 619 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 FGFR1OP2Q9NVK5 253 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 PRMT7Q9NVM4 692 aaPredicted RBP13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 RBPJLQ9UBG7 517 aa13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 USP15Q9Y4E8 981 aaPredicted RBP13.96□□□□□ -0.18
PRKAB1-206ENST00000541640 LOC102724159A0A0B4J2E5 919 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 EXOC1LA0A1B0GW35 172 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 GOLGA8SH3BPF8 625 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 ALOX15BO15296 676 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 KRT19P08727 400 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 PSMC1P62191 440 aaKnown RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 ZNF268Q14587 947 aaPredicted RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 PWP2Q15269 919 aaKnown RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 HADHQ16836 314 aaKnown RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 FAM187BQ17R55 369 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 PPP1R21Q6ZMI0 780 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 PCGF5Q86SE9 256 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 CDR2LQ86X02 465 aaPredicted RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 XYLT1Q86Y38 959 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 SULF1Q8IWU6 871 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 TMEM192Q8IY95 271 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 C1orf127Q8N9H9 656 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 TTC13Q8NBP0 860 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 COPS5Q92905 334 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 HAUS1Q96CS2 278 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 ZNF668Q96K58 619 aaPredicted RBP13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 MAGEB18Q96M61 343 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 TMEM121Q9BTD3 319 aa13.95□□□□□ -0.18
PRKAB1-206ENST00000541640 PHACTR1Q9C0D0 580 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms