RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 CCDC142Q17RM4 750 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 OSTM1Q86WC4 334 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 MAB21L3Q8N8X9 362 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 C1orf127Q8N9H9 656 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 CXorf38Q8TB03 319 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 RIN3Q8TB24 985 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 HPS4Q9NQG7 708 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 GKN1Q9NS71 199 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 CDV3Q9UKY7 258 aaKnown RBP17.49■□□□□ 0.39
TRIM65-203ENST00000540812 EXOC7Q9UPT5 735 aa17.49■□□□□ 0.39
TRIM65-203ENST00000540812 KIF26AQ9ULI4 1882 aaPredicted RBP17.48■□□□□ 0.39
TRIM65-203ENST00000540812 A0A087X0B3 334 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 DCDC2BA2VCK2 349 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 OTOL1A6NHN0 477 aaPredicted RBP17.48■□□□□ 0.39
TRIM65-203ENST00000540812 PRPF40AO75400 957 aaKnown RBP17.48■□□□□ 0.39
TRIM65-203ENST00000540812 RETP07949 1114 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 ACAT1P24752 427 aaKnown RBP17.48■□□□□ 0.39
TRIM65-203ENST00000540812 PNPLA4P41247 253 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 TSPY1Q01534 308 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 ITPRIPL2Q3MIP1 535 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 TXNDC8Q6A555 127 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 TRIM68Q6AZZ1 485 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 PKN3Q6P5Z2 889 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 LONP2Q86WA8 852 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 USP13Q92995 863 aaPredicted RBP17.48■□□□□ 0.39
TRIM65-203ENST00000540812 CHFRQ96EP1 664 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 FAM83CQ9BQN1 747 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 CBWD1Q9BRT8 395 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 PANK2Q9BZ23 570 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 RBAKQ9NYW8 714 aaPredicted RBP17.48■□□□□ 0.39
TRIM65-203ENST00000540812 MAGED2Q9UNF1 606 aaPredicted RBP17.48■□□□□ 0.39
TRIM65-203ENST00000540812 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.48■□□□□ 0.39
TRIM65-203ENST00000540812 SDK1Q7Z5N4 2213 aa17.48■□□□□ 0.39
TRIM65-203ENST00000540812 FRMD3A2A2Y4 597 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 HCRTO43612 131 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 EXTL3O43909 919 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 IDEP14735 1019 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 SDHBP21912 280 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 BFSP1Q12934 665 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 DDR2Q16832 855 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 CSGALNACT2Q8N6G5 542 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 PKMYT1Q99640 499 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 EBF3Q9H4W6 596 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 OLFML3Q9NRN5 406 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 THG1LQ9NWX6 298 aaKnown RBP17.47■□□□□ 0.39
TRIM65-203ENST00000540812 DDX43Q9NXZ2 648 aaKnown RBP17.47■□□□□ 0.39
TRIM65-203ENST00000540812 SIX4Q9UIU6 781 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 PCDHB13Q9Y5F0 798 aa17.47■□□□□ 0.39
TRIM65-203ENST00000540812 HUS1O60921 280 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 TADA3O75528 432 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 PRPF6O94906 941 aaKnown RBP17.46■□□□□ 0.39
TRIM65-203ENST00000540812 ARSAP15289 507 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 PDCP20941 246 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 SYT1P21579 422 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 GARTP22102 1010 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 CYP2F1P24903 491 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 DDX6P26196 483 aaKnown RBP eCLIP17.46■□□□□ 0.393e-6■■■■□ 20
TRIM65-203ENST00000540812 AVPR1AP37288 418 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 TXLNAP40222 546 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 RUNX3Q13761 415 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 NFE2Q16621 373 aaPredicted RBP17.46■□□□□ 0.39
TRIM65-203ENST00000540812 INTS6LQ5JSJ4 861 aaKnown RBP17.46■□□□□ 0.39
TRIM65-203ENST00000540812 FSTL4Q6MZW2 842 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 CCDC73Q6ZRK6 1079 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 MON1AQ86VX9 555 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 SYCP3Q8IZU3 236 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 SYNPOQ8N3V7 929 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 NOC3LQ8WTT2 800 aaKnown RBP17.46■□□□□ 0.39
TRIM65-203ENST00000540812 LEO1Q8WVC0 666 aaPredicted RBP17.46■□□□□ 0.39
TRIM65-203ENST00000540812 USP28Q96RU2 1077 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 ACBD6Q9BR61 282 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 PDE11AQ9HCR9 933 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 ZMYM5Q9UJ78 669 aa17.46■□□□□ 0.39
TRIM65-203ENST00000540812 DENND4CQ5VZ89 1909 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 KRT19P08727 400 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 CSH1P0DML2 217 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 CSH2P0DML3 217 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 CNR2P34972 360 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 STAT6P42226 847 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 PXNP49023 591 aaPredicted RBP17.45■□□□□ 0.38
TRIM65-203ENST00000540812 TMEM196Q5HYL7 178 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 LMBRD2Q68DH5 695 aaPredicted RBP17.45■□□□□ 0.38
TRIM65-203ENST00000540812 NAIF1Q69YI7 327 aaPredicted RBP17.45■□□□□ 0.38
TRIM65-203ENST00000540812 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.45■□□□□ 0.38
TRIM65-203ENST00000540812 WDR5BQ86VZ2 330 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 FAM160A2Q8N612 972 aaPredicted RBP17.45■□□□□ 0.38
TRIM65-203ENST00000540812 LRRC52Q8N7C0 313 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 CACTINQ8WUQ7 758 aaKnown RBP17.45■□□□□ 0.38
TRIM65-203ENST00000540812 MRPS31Q92665 395 aaKnown RBP17.45■□□□□ 0.38
TRIM65-203ENST00000540812 RTKNQ9BST9 563 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 MTMR12Q9C0I1 747 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 SEMA4GQ9NTN9 838 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 TDP1Q9NUW8 608 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 PANK4Q9NVE7 773 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 POLR3BQ9NW08 1133 aaPredicted RBP17.45■□□□□ 0.38
TRIM65-203ENST00000540812 GTF3C4Q9UKN8 822 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 ITGA11Q9UKX5 1188 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 SNX9Q9Y5X1 595 aa17.45■□□□□ 0.38
TRIM65-203ENST00000540812 EPG5Q9HCE0 2579 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms