RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SRGAP2B	P0DMP2	458 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SMIM10L2A	P0DMW4	78 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SMIM10L2B	P0DMW5	78 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	RARG	P13631	454 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SELP	P16109	830 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	BRD2	P25440	801 aa	Known RBP	5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CCND3	P30281	292 aa	Predicted RBP	5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SOX10	P56693	466 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CALCOCO2	Q13137	446 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	MOGS	Q13724	837 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ARMC3	Q5W041	872 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ANO7	Q6IWH7	933 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	KIAA1841	Q6NSI8	718 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	FAM186B	Q8IYM0	893 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	EMID1	Q96A84	441 aa	Predicted RBP	5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PAWR	Q96IZ0	340 aa	Known RBP	5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SH3GL3	Q99963	347 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	TSPYL2	Q9H2G4	693 aa	Predicted RBP	5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	RXFP1	Q9HBX9	757 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	RGL1	Q9NZL6	768 aa		5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	TTC7A	Q9ULT0	858 aa	Predicted RBP	5.99	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ASTN1	O14525	1302 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	EP400	Q96L91	3159 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	RBM47	A0AV96	593 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CLDN3	O15551	220 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	EXOC3	O60645	756 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ITGB5	P18084	799 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CHRNA3	P32297	505 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	COIL	P38432	576 aa	Predicted RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	NPEPPS	P55786	919 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	DNAJC3	Q13217	504 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	NOTUM	Q6P988	496 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ASRGL1	Q7L266	308 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	RNF149	Q8NC42	400 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CKAP2	Q8WWK9	683 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	C9orf72	Q96LT7	481 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	NUDCD1	Q96RS6	583 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	GPR20	Q99678	358 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SYT15	Q9BQS2	421 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PITPNM3	Q9BZ71	974 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PPP1R12C	Q9BZL4	782 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	TRIM7	Q9C029	511 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	STMN4	Q9H169	189 aa	Predicted RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CCDC134	Q9H6E4	229 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PDGFC	Q9NRA1	345 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	TRAF3IP3	Q9Y228	551 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	NUB1	Q9Y5A7	615 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PCDHB7	Q9Y5E2	793 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SMIM35	A0A1B0GVV1	85 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783		A6NHS1	94 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SPOP	O43791	374 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	LYPLA2	O95372	231 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CHRNB2	P17787	502 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	EPHB2	P29323	1055 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SNRPF	P62306	86 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SLMAP	Q14BN4	828 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	DCAF4L1	Q3SXM0	396 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	WDR44	Q5JSH3	913 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	INTS8	Q75QN2	995 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	METTL23	Q86XA0	190 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	TSC22D3	Q99576	134 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	MRPL9	Q9BYD2	267 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	METTL14	Q9HCE5	456 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	METTL5	Q9NRN9	209 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SETD4	Q9NVD3	440 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CPSF2	Q9P2I0	782 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PHF24	Q9UPV7	400 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PCDHA3	Q9Y5H8	950 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	FAM86B1	E9PN63	330 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	TGFB1I1	O43294	461 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	GJB6	O95452	261 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CALCA	P01258	141 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	FAM86B2	P0C5J1	330 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ZNF865	P0CJ78	1059 aa	Predicted RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PEX3	P56589	373 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	NLRP11	P59045	1033 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	TLE2	Q04725	743 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SEL1L2	Q5TEA6	688 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	TMEM154	Q6P9G4	183 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	UBL4B	Q8N7F7	174 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	IL31RA	Q8NI17	732 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	CYP2W1	Q8TAV3	490 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	FBF1	Q8TES7	1133 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	POMGNT1	Q8WZA1	660 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	COPS5	Q92905	334 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	KAT5	Q92993	513 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ART4	Q93070	314 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ZNF333	Q96JL9	665 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ZSWIM1	Q9BR11	485 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	STK33	Q9BYT3	514 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	GPR88	Q9GZN0	384 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	INTS2	Q9H0H0	1204 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	RPF1	Q9H9Y2	349 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	UBE2T	Q9NPD8	197 aa	Predicted RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SLC38A7	Q9NVC3	462 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	KANSL3	Q9P2N6	904 aa		5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PIN4	Q9Y237	131 aa	Known RBP	5.98	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ANKRD62	A6NC57	917 aa		5.97	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PODXL	O00592	558 aa		5.97	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	PDXK	O00764	312 aa		5.97	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms