RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PIK3R5Q8WYR1 880 aa17.87■□□□□ 0.45
UBC-208ENST00000540700 BCO2Q9BYV7 579 aa17.87■□□□□ 0.45
UBC-208ENST00000540700 A0A1B0GTH6 734 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 GTPBP10A4D1E9 387 aaKnown RBP17.86■□□□□ 0.45
UBC-208ENST00000540700 C2orf71A6NGG8 1288 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 PES1O00541 588 aaKnown RBP17.86■□□□□ 0.45
UBC-208ENST00000540700 TRAPPC3O43617 180 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 CXCL14O95715 111 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 ODC1P11926 461 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 TYMPP19971 482 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 ITIH3Q06033 890 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 SMC1AQ14683 1233 aaKnown RBP17.86■□□□□ 0.45
UBC-208ENST00000540700 ZNF667Q5HYK9 610 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 TRIM65Q6PJ69 517 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 TOP6BLQ8N6T0 577 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 UBR7Q8N806 425 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 MRPL43Q8N983 215 aaKnown RBP17.86■□□□□ 0.45
UBC-208ENST00000540700 TDRD5Q8NAT2 981 aaKnown RBP17.86■□□□□ 0.45
UBC-208ENST00000540700 TAF4BQ92750 862 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 NIF3L1Q9GZT8 377 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 RTN4Q9NQC3 1192 aaKnown RBP17.86■□□□□ 0.45
UBC-208ENST00000540700 HMGXB4Q9UGU5 601 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 SIK3Q9Y2K2 1263 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 MYO10Q9HD67 2058 aa17.86■□□□□ 0.45
UBC-208ENST00000540700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.85■□□□□ 0.45
UBC-208ENST00000540700 GABRDO14764 452 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 EPHB6O15197 1021 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 CLASP2O75122 1294 aaKnown RBP17.85■□□□□ 0.45
UBC-208ENST00000540700 OAZ2O95190 189 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 URODP06132 367 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 CNPP09543 421 aaKnown RBP17.85■□□□□ 0.45
UBC-208ENST00000540700 PAX3P23760 479 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 LMO2P25791 158 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 TNNC1P63316 161 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 PSMD5Q16401 504 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 EXOC3L4Q17RC7 722 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 GBP6Q6ZN66 633 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 ADGRF2Q8IZF7 708 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 KREMEN1Q96MU8 473 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 TWNKQ96RR1 684 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 MMS19Q96T76 1030 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 CLSTN3Q9BQT9 956 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 RXFP1Q9HBX9 757 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 MTRRQ9UBK8 725 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 R3HCC1Q9Y3T6 440 aaKnown RBP17.85■□□□□ 0.45
UBC-208ENST00000540700 IRAK3Q9Y616 596 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 NCOR2Q9Y618 2525 aa17.85■□□□□ 0.45
UBC-208ENST00000540700 TEX28O15482 410 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 HUS1O60921 280 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 TACC1O75410 805 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 NOL4O94818 638 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 CLSTN1O94985 981 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 OR4Q2P0C623 313 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 WARSP23381 471 aaKnown RBP17.84■□□□□ 0.45
UBC-208ENST00000540700 ACAT1P24752 427 aaKnown RBP17.84■□□□□ 0.45
UBC-208ENST00000540700 MTHFRP42898 656 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 CDR1P51861 262 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 UBXN1Q04323 297 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 YWHAHQ04917 246 aaPredicted RBP17.84■□□□□ 0.45
UBC-208ENST00000540700 ORC1Q13415 861 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 NR1I3Q14994 352 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 OVOS1Q6IE37 1185 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 RRAGAQ7L523 313 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 GLYCTKQ8IVS8 523 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 APPL2Q8NEU8 664 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 WHAMMQ8TF30 809 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 KLHL5Q96PQ7 755 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 LPIN3Q9BQK8 851 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 LSM14BQ9BX40 385 aaKnown RBP17.84■□□□□ 0.45
UBC-208ENST00000540700 DPEP3Q9H4B8 488 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 MRPL17Q9NRX2 175 aaKnown RBP17.84■□□□□ 0.45
UBC-208ENST00000540700 FBXL5Q9UKA1 691 aa17.84■□□□□ 0.45
UBC-208ENST00000540700 PI15O43692 258 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 VNN2O95498 520 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 SERPINC1P01008 464 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 ACO1P21399 889 aaKnown RBP17.83■□□□□ 0.44
UBC-208ENST00000540700 CLCN5P51795 746 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 CUL2Q13617 745 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 SYCP1Q15431 976 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 WDR44Q5JSH3 913 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 KIAA1841Q6NSI8 718 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 DPH6Q7L8W6 267 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 LRRTM3Q86VH5 581 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 GPR65Q8IYL9 337 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 ZDHHC14Q8IZN3 488 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 ANKRD20A12PQ8NF67 263 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 NT5C1BQ96P26 610 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 ERGIC2Q96RQ1 377 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 PKMYT1Q99640 499 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 IMPG2Q9BZV3 1241 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 GANQ9H2C0 597 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 DDX43Q9NXZ2 648 aaKnown RBP17.83■□□□□ 0.44
UBC-208ENST00000540700 IFNKQ9P0W0 207 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 STK39Q9UEW8 545 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 BACE2Q9Y5Z0 518 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 CDY1Q9Y6F8 540 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 DMXL1Q9Y485 3027 aa17.83■□□□□ 0.44
UBC-208ENST00000540700 ATP2C2O75185 946 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 CD58P19256 250 aa17.82■□□□□ 0.44
UBC-208ENST00000540700 PBX1P40424 430 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms