RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 GRSF1Q12849 480 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 CAPSQ13938 189 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 MXD4Q14582 209 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 TRIM61Q5EBN2 209 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 TMEM196Q5HYL7 178 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 ATL3Q6DD88 541 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 ANKS3Q6ZW76 656 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 DAW1Q8N136 415 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 MCPH1Q8NEM0 835 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 HASPINQ8TF76 798 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 ZNF512Q96ME7 567 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 PAAF1Q9BRP4 392 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 PANK2Q9BZ23 570 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 POLR3FQ9H1D9 316 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 CLMPQ9H6B4 373 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 GTSE1Q9NYZ3 720 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 PCDHA7Q9UN72 937 aa9.65□□□□□ -0.86
TRAPPC1-202ENST00000540486 ARID2Q68CP9 1835 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 NPHP3-ACAD11A0A0J9YXS1 232 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 MOSPD3O75425 235 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 KIF4AO95239 1232 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 ATF2P15336 505 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 ENGP17813 658 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 AKAP5P24588 427 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 MAPK8P45983 427 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 ATXN3P54252 364 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 EPHA5P54756 1037 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 USP46P62068 366 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 FAM193AP78312 1265 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 MAPK7Q13164 816 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 MCM6Q14566 821 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 SHC4Q6S5L8 630 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 SYT13Q7L8C5 426 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 PIGKQ92643 395 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 CALML4Q96GE6 196 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 CCDC43Q96MW1 224 aaKnown RBP9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 HHIPQ96QV1 700 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 NFKBIZQ9BYH8 718 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 KDM4CQ9H3R0 1056 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 SLITRK6Q9H5Y7 841 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 OBP2AQ9NY56 170 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 CFAP45Q9UL16 551 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 CFAP46Q8IYW2 2715 aa9.64□□□□□ -0.87
TRAPPC1-202ENST00000540486 NCANO14594 1321 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 TRDMT1O14717 391 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 TSPAN1O60635 241 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 CUTAO60888 179 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 OPHN1O60890 802 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 HIP1RO75146 1068 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 DHPSP49366 369 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 AMPD2Q01433 879 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 ROR1Q01973 937 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 KCNC4Q03721 635 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 MBTD1Q05BQ5 628 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 RAD51AP2Q09MP3 1159 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 TFDP1Q14186 410 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 DHX8Q14562 1220 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 TRIP6Q15654 476 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 ITPRIPL2Q3MIP1 535 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 FBXO43Q4G163 708 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 SLC8B1Q6J4K2 584 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 SLC23A3Q6PIS1 610 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 SYT12Q8IV01 421 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 RAD54LQ92698 747 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 RSPRY1Q96DX4 576 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 CDK5RAP3Q96JB5 506 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 NTPCRQ9BSD7 190 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 FZD8Q9H461 694 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 NXF3Q9H4D5 531 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 CYP4F11Q9HBI6 524 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 ASAH2Q9NR71 780 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 SNTG2Q9NY99 539 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 MAFFQ9ULX9 164 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 PCDHB3Q9Y5E6 796 aa9.63□□□□□ -0.87
TRAPPC1-202ENST00000540486 CASTOR2A6NHX0 329 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 LRRIQ4A6NIV6 560 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 INO80B-WBP1J3KQ70 363 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 TNFRSF10BO14763 440 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 B4GALT5O43286 388 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 TRAPPC3O43617 180 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 NTRK1P04629 796 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 EDN1P05305 212 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 THP07101 528 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 MYL4P12829 197 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 DRD1P21728 446 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 NAMPTP43490 491 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 ABCG1P45844 678 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 NPTX2P47972 431 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 DGKEP52429 567 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 PEX3P56589 373 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 TEAD2Q15562 447 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 MAPK6Q16659 721 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 RRAGBQ5VZM2 374 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 TPGS2Q68CL5 300 aa9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 CDCA2Q69YH5 1023 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC1-202ENST00000540486 FSTL4Q6MZW2 842 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms