RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 INTS6LQ5JSJ4 861 aaKnown RBP14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 WDR49Q8IV35 697 aa14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 MYRFLQ96LU7 910 aa14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 SEPT5Q99719 369 aaPredicted RBP14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 MTMR12Q9C0I1 747 aa14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 ATXN3LQ9H3M9 355 aa14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 AGPAT3Q9NRZ7 376 aa14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 DDX43Q9NXZ2 648 aaKnown RBP14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 CGNQ9P2M7 1197 aaKnown RBP14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 OTOGLQ3ZCN5 2332 aa14.09□□□□□ -0.15
SEMA4D-223ENST00000540475 TMEM191BP0C7N4 346 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 DDX6P26196 483 aaKnown RBP eCLIP14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 MYL7Q01449 175 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 ARHGAP29Q52LW3 1261 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 ARHGAP15Q53QZ3 475 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 GPR158Q5T848 1215 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 ZC3H14Q6PJT7 736 aaKnown RBP14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 OSTM1Q86WC4 334 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 ZBTB44Q8NCP5 570 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 TRMT2BQ96GJ1 504 aaKnown RBP14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 FUBP3Q96I24 572 aaKnown RBP eCLIP14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 ANKRD36BP1Q96IX9 119 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 FAM84AQ96KN4 292 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 SLC46A2Q9BY10 475 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 GZF1Q9H116 711 aaPredicted RBP14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 CHRDQ9H2X0 955 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 PRMT8Q9NR22 394 aaPredicted RBP14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 SPATA6Q9NWH7 488 aaPredicted RBP14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 ABI2Q9NYB9 513 aaPredicted RBP14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 FAM13BQ9NYF5 915 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 SNX9Q9Y5X1 595 aa14.08□□□□□ -0.16
SEMA4D-223ENST00000540475 MYBPHLA2RUH7 354 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 LAMTOR5O43504 91 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 KLRC4O43908 158 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 LILRB5O75023 590 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 PRPF40AO75400 957 aaKnown RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 NOL4O94818 638 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 STAU1O95793 577 aaKnown RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 LMNAP02545 664 aaKnown RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 SLFN14P0C7P3 912 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 CSH1P0DML2 217 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 CSH2P0DML3 217 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 CHRNB1P11230 501 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 TDGF1P13385 188 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 ME1P48163 572 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 NLRP12P59046 1061 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 DNM1Q05193 864 aaKnown RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 BFSP1Q12934 665 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 MYO1EQ12965 1108 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 CUL4BQ13620 913 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 PSMD6Q15008 389 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 SNRNP35Q16560 246 aaKnown RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 TRAPPC11Q7Z392 1133 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 ADSSL1Q8N142 457 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 XXYLT1Q8NBI6 393 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 GIPC2Q8TF65 315 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 KBTBD7Q8WVZ9 684 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 FAM3CQ92520 227 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 HPDLQ96IR7 371 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 CEP295NLQ96MC4 621 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 SLITRK6Q9H5Y7 841 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 C8orf33Q9H7E9 229 aaPredicted RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 PIAS3Q9Y6X2 628 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 R4GN57 208 aa14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 EP300Q09472 2414 aaPredicted RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 HELZP42694 1942 aaKnown RBP14.07□□□□□ -0.16
SEMA4D-223ENST00000540475 FAM237AA0A1B0GTK4 181 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 ACTN4O43707 911 aaKnown RBP14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 PRAMEF12O95522 483 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 CST3P01034 146 aaPredicted RBP14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 TNNC2P02585 160 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 KRT19P08727 400 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 CMA1P23946 247 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 CYP2F1P24903 491 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 PCSK1P29120 753 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 CASP1P29466 404 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 MAGEA11P43364 429 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 RPL10AP62906 217 aaKnown RBP14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 CLDN10P78369 228 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 PLCB2Q00722 1185 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 MTAPQ13126 283 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 ZNF268Q14587 947 aaPredicted RBP14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 RALGPS2Q86X27 583 aaPredicted RBP14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 YAF2Q8IY57 180 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 ADGRF2Q8IZF7 708 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 CMTM8Q8IZV2 173 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 CELF5Q8N6W0 485 aaKnown RBP14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 SUMF1Q8NBK3 374 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 FAM200AQ8TCP9 573 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 BPIFB1Q8TDL5 484 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 PI4K2AQ9BTU6 479 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 FAM126AQ9BYI3 521 aaPredicted RBP14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 BLZF1Q9H2G9 400 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 GTF3C4Q9UKN8 822 aa14.06□□□□□ -0.16
SEMA4D-223ENST00000540475 HPSEQ9Y251 543 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms