RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 ZNF483Q8TF39 744 aaPredicted RBP13.58□□□□□ -0.24
MSH6-210ENST00000540021 GMCL1Q96IK5 515 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 WWP1Q9H0M0 922 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 ZC3H7BQ9UGR2 993 aaKnown RBP13.58□□□□□ -0.24
MSH6-210ENST00000540021 FIS1Q9Y3D6 152 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 PRPSAP2O60256 369 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 PEX11AO75192 247 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 CYP3A4P08684 503 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 ITGB5P18084 799 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 JAK3P52333 1124 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 ROR1Q01973 937 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 TMED1Q13445 227 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 MORF4L2Q15014 288 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 TFDP3Q5H9I0 405 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
MSH6-210ENST00000540021 CLPTM1LQ96KA5 538 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 VPS11Q9H270 941 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 CCDC134Q9H6E4 229 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 ADGRA3Q8IWK6 1321 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 MAGEA13PA6NCF6 341 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 PSMG1O95456 288 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 ACADSP16219 412 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 ELK3P41970 407 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 FAAP100Q0VG06 881 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 MAPK6Q16659 721 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 MMEL1Q495T6 779 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 TRIM72Q6ZMU5 477 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 MCPH1Q8NEM0 835 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 E2F7Q96AV8 911 aa13.58□□□□□ -0.24
MSH6-210ENST00000540021 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
MSH6-210ENST00000540021 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 KRT38O76015 456 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 RPS6P62753 249 aaKnown RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 KRT76Q01546 638 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 MED21Q13503 144 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 LAMB3Q13751 1172 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 ZNF699Q32M78 642 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 SLC45A4Q5BKX6 768 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 FAM102AQ5T9C2 384 aaPredicted RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 TTC7BQ86TV6 843 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 ALYREFQ86V81 257 aaKnown RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 SCUBE1Q8IWY4 988 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 ADPGKQ9BRR6 497 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 MECRQ9BV79 373 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 FOXP3Q9BZS1 431 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 POLRMTO00411 1230 aaKnown RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 HNRNPCL1O60812 293 aaKnown RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 USP1O94782 785 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 STAMBPO95630 424 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 GYS1P13807 737 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 ATP6V1B1P15313 513 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 NPR1P16066 1061 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 VCPP55072 806 aaKnown RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 MGAT5Q09328 741 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 DAW1Q8N136 415 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 EFCAB3Q8N7B9 438 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 TTC13Q8NBP0 860 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 HEXIM2Q96MH2 286 aaKnown RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 DMAC2Q9NW81 257 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 FAM198AQ9UFP1 575 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 LIASO43766 372 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 PSAPP07602 524 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 DEUP1Q05D60 604 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 MAMLD1Q13495 774 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 ARMC3Q5W041 872 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 ANO7Q6IWH7 933 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 PLEKHO2Q8TD55 490 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 NMD3Q96D46 503 aaKnown RBP13.57□□□□□ -0.24
MSH6-210ENST00000540021 FERMT1Q9BQL6 677 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 HERPUD2Q9BSE4 406 aa13.57□□□□□ -0.24
MSH6-210ENST00000540021 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 IGKV6D-41A0A0C4DH26 115 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 ASMTLO95671 621 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 KRT7P08729 469 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 GLRA2P23416 452 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 SKIV2L2P42285 1042 aaKnown RBP13.56□□□□□ -0.24
MSH6-210ENST00000540021 IGBP1P78318 339 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 UGCGQ16739 394 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 PARP6Q2NL67 630 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 CCNJLQ8IV13 435 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 ALKBH8Q96BT7 664 aaKnown RBP13.56□□□□□ -0.24
MSH6-210ENST00000540021 NLRP4Q96MN2 994 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 TMEM39BQ9GZU3 492 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 PACSIN3Q9UKS6 424 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 H0YCG3 227 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 CREB3O43889 395 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 PDE5AO76074 875 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 NLRP11P59045 1033 aaKnown RBP13.56□□□□□ -0.24
MSH6-210ENST00000540021 DSG1Q02413 1049 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 STX3Q13277 289 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
MSH6-210ENST00000540021 KBTBD12Q3ZCT8 623 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 SLC9A9Q8IVB4 645 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 MAP7D3Q8IWC1 876 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 ZC3H3Q8IXZ2 948 aaKnown RBP13.56□□□□□ -0.24
MSH6-210ENST00000540021 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.56□□□□□ -0.24
MSH6-210ENST00000540021 ABRAQ8N0Z2 381 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 NME8Q8N427 588 aa13.56□□□□□ -0.24
MSH6-210ENST00000540021 CCNYQ8ND76 341 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms