RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 CD302Q8IX05 232 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 THEM5Q8N1Q8 247 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 CPA6Q8N4T0 437 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 CCDC26Q8TAB7 109 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 RIN3Q8TB24 985 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 SPPL2BQ8TCT7 592 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 EZH1Q92800 747 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 CD101Q93033 1021 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 C8orf76Q96K31 380 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 ECT2Q9H8V3 914 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 RPF1Q9H9Y2 349 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 LHX6Q9UPM6 363 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 INVSQ9Y283 1065 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 ABCA7Q8IZY2 2146 aa12.58□□□□□ -0.4
CLSTN3-209ENST00000539982 DSPP15924 2871 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 PATE3B3GLJ2 98 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 H0YCG3 227 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 FAM189A1O60320 539 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 CDC25AP30304 524 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 RAD51AP2Q09MP3 1159 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 PSMD2Q13200 908 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 UAP1L1Q3KQV9 507 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 JADE1Q6IE81 842 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 CYP2U1Q7Z449 544 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 DEFB124Q8NES8 71 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 TSTD1Q8NFU3 115 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 ZCCHC14Q8WYQ9 949 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 MRPS31Q92665 395 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 BICD1Q96G01 975 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 DUS2Q9NX74 493 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 NOL7Q9UMY1 257 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 NEUROG3Q9Y4Z2 214 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 NUP205Q92621 2012 aa12.57□□□□□ -0.4
CLSTN3-209ENST00000539982 ANO9A1A5B4 782 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 PP2D1A8MPX8 630 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 CYB561D2O14569 222 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 OGTO15294 1046 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 LIG4P49917 911 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 NCKAP1LP55160 1127 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 LMAN2Q12907 356 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 NBR1Q14596 966 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 MTF1Q14872 753 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 RASSF3Q86WH2 238 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 DCP1BQ8IZD4 617 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 SYT2Q8N9I0 419 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 OSCP1Q8WVF1 389 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 KCNN1Q92952 543 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 MMTAG2Q9BU76 263 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 TPSD1Q9BZJ3 242 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 SLC32A1Q9H598 525 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 ABI2Q9NYB9 513 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 LARSQ9P2J5 1176 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 EVLQ9UI08 416 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 DERAQ9Y315 318 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 MSRB2Q9Y3D2 182 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 DENND4CQ5VZ89 1909 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 ZNF638Q14966 1978 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 THADAQ6YHU6 1953 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 DMXL2Q8TDJ6 3036 aa12.56□□□□□ -0.4
CLSTN3-209ENST00000539982 A0A0B4J269 797 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 LAD1O00515 517 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 HYAL3O43820 417 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 CSH1P0DML2 217 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 CSH2P0DML3 217 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 BCKDHBP21953 392 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 DHPSP49366 369 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 FAM160A1Q05DH4 1040 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 ST3GAL1Q11201 340 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 NR1H3Q13133 447 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 GNL2Q13823 731 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 IL17AQ16552 155 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 DTHD1Q6ZMT9 781 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 FBXO18Q8NFZ0 1043 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 USP33Q8TEY7 942 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 PIGKQ92643 395 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 ATP2A3Q93084 1043 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 CNOT6LQ96LI5 555 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 PYM1Q9BRP8 204 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 KCND2Q9NZV8 630 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 CPSF3Q9UKF6 684 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 MAGED2Q9UNF1 606 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 PCDHB5Q9Y5E4 795 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 NBEAQ8NFP9 2946 aa12.55□□□□□ -0.4
CLSTN3-209ENST00000539982 K7EQS6 105 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 HNRNPDLO14979 420 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 PRPF40AO75400 957 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 PIGRP01833 764 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 NFICP08651 508 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 SCP2P22307 547 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 PRPHP41219 470 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 IFNAR2P48551 515 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 TAF6P49848 677 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 TOB1P50616 345 aaPredicted RBP12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 TMEM132DQ14C87 1099 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 ZRSR1Q15695 479 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 ZNF77Q15935 545 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 EML3Q32P44 896 aa12.54□□□□□ -0.4
CLSTN3-209ENST00000539982 C2orf27AQ580R0 203 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms