RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 KLRC2P26717 231 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 POLR2BP30876 1174 aaKnown RBP6.95□□□□□ -1.3
SNHG1-212ENST00000539975 PIK3CAP42336 1068 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 MAP2K3P46734 347 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 CASP4P49662 377 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 LILRA4P59901 499 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 MYL5Q02045 173 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 YWHAHQ04917 246 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-212ENST00000539975 TYRO3Q06418 890 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 DPCR1Q3MIW9 517 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 ZCWPW2Q504Y3 356 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 TBCELQ5QJ74 424 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 PLPP4Q5VZY2 271 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 TTI2Q6NXR4 508 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-212ENST00000539975 TRAPPC11Q7Z392 1133 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 MRPL43Q8N983 215 aaKnown RBP6.95□□□□□ -1.3
SNHG1-212ENST00000539975 SCG3Q8WXD2 468 aaKnown RBP6.95□□□□□ -1.3
SNHG1-212ENST00000539975 PPM1EQ8WY54 764 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 MYLIPQ8WY64 445 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 RIN2Q8WYP3 895 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-212ENST00000539975 TAF4BQ92750 862 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 HPDLQ96IR7 371 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 POP1Q99575 1024 aaKnown RBP6.95□□□□□ -1.3
SNHG1-212ENST00000539975 CDCA3Q99618 268 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-212ENST00000539975 THAP9Q9H5L6 903 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 IGFLR1Q9H665 355 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 NDFIP2Q9NV92 336 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 MTMR10Q9NXD2 777 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 TMEM63CQ9P1W3 806 aa6.95□□□□□ -1.3
SNHG1-212ENST00000539975 NOVA2Q9UNW9 492 aaKnown RBP6.95□□□□□ -1.3
SNHG1-212ENST00000539975 LRRIQ3A6PVS8 624 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 PIRO00625 290 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 CYB561D2O14569 222 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ATXN7O15265 892 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 CTSAP10619 480 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 POU3F3P20264 500 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 BMP6P22004 513 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ELF1P32519 619 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 GCLMP48507 274 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 LHX1P48742 406 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 NDUFV1P49821 464 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ZNF165P49910 485 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 MXI1P50539 228 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 PMS1P54277 932 aaKnown RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 MYL7Q01449 175 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 DSG1Q02413 1049 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 SOX4Q06945 474 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 NAB2Q15742 525 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 CCDC85BQ15834 202 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 PSMD5Q16401 504 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 HIF1AQ16665 826 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 SWI5Q1ZZU3 235 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ZNF699Q32M78 642 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 WDR72Q3MJ13 1102 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ANO6Q4KMQ2 910 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 FILIP1LQ4L180 1135 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 CTXN3Q4LDR2 81 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ZNF667Q5HYK9 610 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 FKBP15Q5T1M5 1219 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 LMBRD2Q68DH5 695 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 OVOS1Q6IE37 1185 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ZNF280DQ6N043 979 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 RBM43Q6ZSC3 357 aaKnown RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 DPH6Q7L8W6 267 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 RBM23Q86U06 439 aaKnown RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 GPR65Q8IYL9 337 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 TMEM86AQ8N2M4 240 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 TTC39CQ8N584 583 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 FBXL13Q8NEE6 735 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ZSWIM2Q8NEG5 633 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ENOX1Q8TC92 643 aaKnown RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 SUSD3Q96L08 255 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 PAAF1Q9BRP4 392 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 C2orf49Q9BVC5 232 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 HERC2P3Q9BVR0 1158 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 ZCCHC2Q9C0B9 1178 aaKnown RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 GZF1Q9H116 711 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-212ENST00000539975 DNAJC25Q9H1X3 360 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 SNX25Q9H3E2 840 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 TMEM8AQ9HCN3 771 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 NEUROD4Q9HD90 331 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 NFE2L3Q9Y4A8 694 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 SNX9Q9Y5X1 595 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 DNAH12Q6ZR08 3092 aa6.94□□□□□ -1.3
SNHG1-212ENST00000539975 WDR81Q562E7 1941 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 COL4A6Q14031 1691 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 ANO9A1A5B4 782 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 RBAK-RBAKDNI3L0D1 243 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 I3L4J1 428 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 P4HA2O15460 535 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 BNIP3LO60238 219 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 ARHGEF15O94989 841 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 AFPP02771 609 aaKnown RBP6.93□□□□□ -1.3
SNHG1-212ENST00000539975 TPM3P06753 285 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 FAM163BP0C2L3 166 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 FAM157BP0CG42 384 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 CPB1P15086 417 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 TYMPP19971 482 aa6.93□□□□□ -1.3
SNHG1-212ENST00000539975 FGFR3P22607 806 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms