RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 LMNB2Q03252 620 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 MAPRE1Q15691 268 aaKnown RBP16.43■□□□□ 0.22
UBE3B-211ENST00000539843 INTS6LQ5JSJ4 861 aaKnown RBP16.43■□□□□ 0.22
UBE3B-211ENST00000539843 DPH6Q7L8W6 267 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 GPIHBP1Q8IV16 184 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 ADGRF2Q8IZF7 708 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 NELL1Q92832 810 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 MTMR12Q9C0I1 747 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 PCIF1Q9H4Z3 704 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 MAGEF1Q9HAY2 307 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 GDAP2Q9NXN4 497 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 EHD2Q9NZN4 543 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 L1RE1Q9UN81 338 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 CACNA1IQ9P0X4 2223 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 PATJQ8NI35 1801 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 PRR5-ARHGAP8B1AHC4 643 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 EIF3DO15371 548 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBE3B-211ENST00000539843 CNR2P34972 360 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 PDE6CP51160 858 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 CASP5P51878 434 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 ARHGAP8P85298 464 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 DUOXA2Q1HG44 320 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 PRR23BQ6ZRT6 265 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 LRRTM3Q86VH5 581 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 DCLK2Q8N568 766 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 MAB21L3Q8N8X9 362 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 LINC00301Q8NCQ3 95 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 TTC8Q8TAM2 541 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 RSPRY1Q96DX4 576 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 FUBP3Q96I24 572 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBE3B-211ENST00000539843 ZFYVE19Q96K21 471 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 FNBP1Q96RU3 617 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 MKNK1Q9BUB5 465 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 IKZF4Q9H2S9 585 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 PDE11AQ9HCR9 933 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 USP18Q9UMW8 372 aa16.42■□□□□ 0.22
UBE3B-211ENST00000539843 F5P12259 2224 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 TSC2P49815 1807 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 SHISA7A6NL88 538 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 CUTAO60888 179 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 PRAMEF12O95522 483 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 YEATS4O95619 227 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 SOX9P48436 509 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 CDR1P51861 262 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 NLRP12P59046 1061 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 GRSF1Q12849 480 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBE3B-211ENST00000539843 PON2Q15165 354 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 LAIR1Q6GTX8 287 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 HS2ST1Q7LGA3 356 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 ZNF687Q8N1G0 1237 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 DHX58Q96C10 678 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 RMDN1Q96DB5 314 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 HPDLQ96IR7 371 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 SLC46A2Q9BY10 475 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 IL21Q9HBE4 155 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 TDP1Q9NUW8 608 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 INTS13Q9NVM9 706 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 FAM13BQ9NYF5 915 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 NCANO14594 1321 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 UBE4BO95155 1302 aa16.41■□□□□ 0.22
UBE3B-211ENST00000539843 ATG13O75143 517 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 CLSTN1O94985 981 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 PAPSS2O95340 614 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-211ENST00000539843 ACAT1P24752 427 aaKnown RBP16.4■□□□□ 0.22
UBE3B-211ENST00000539843 ANXA13P27216 316 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 SNRPFP62306 86 aaKnown RBP16.4■□□□□ 0.22
UBE3B-211ENST00000539843 SATB1Q01826 763 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 SIM2Q14190 667 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-211ENST00000539843 PDGFRLQ15198 375 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 CFAP221Q4G0U5 840 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 FAM26FQ5R3K3 315 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 MON1AQ86VX9 555 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 LONP2Q86WA8 852 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 WDR49Q8IV35 697 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 SCN4BQ8IWT1 228 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 TRMT2BQ96GJ1 504 aaKnown RBP16.4■□□□□ 0.22
UBE3B-211ENST00000539843 MMS19Q96T76 1030 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 TRIM9Q9C026 710 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 SMG9Q9H0W8 520 aaKnown RBP16.4■□□□□ 0.22
UBE3B-211ENST00000539843 TRPC7Q9HCX4 862 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 HSPBP1Q9NZL4 362 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 CDV3Q9UKY7 258 aaKnown RBP16.4■□□□□ 0.22
UBE3B-211ENST00000539843 TICRRQ7Z2Z1 1910 aa16.4■□□□□ 0.22
UBE3B-211ENST00000539843 TRAV19A0A0A6YYK7 116 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 FOXD2O60548 495 aaPredicted RBP16.39■□□□□ 0.21
UBE3B-211ENST00000539843 F11P03951 625 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 CKMP06732 381 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 USP17L7P0C7H9 530 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 HMGA1P17096 107 aaKnown RBP16.39■□□□□ 0.21
UBE3B-211ENST00000539843 TNNI1P19237 187 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 RUNX3Q13761 415 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 ZNF268Q14587 947 aaPredicted RBP16.39■□□□□ 0.21
UBE3B-211ENST00000539843 KCNB1Q14721 858 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 DDR2Q16832 855 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 CEP68Q76N32 757 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.39■□□□□ 0.21
UBE3B-211ENST00000539843 CPA6Q8N4T0 437 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms