RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 IFT81Q8WYA0 676 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 DDX27Q96GQ7 796 aaKnown RBP23.74■■□□□ 1.39
HOMER3-204ENST00000539827 SLITRK6Q9H5Y7 841 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 PADI3Q9ULW8 664 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 PCNTO95613 3336 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 GOLGA6L10A0A0M3HER8 536 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 CABYRO75952 493 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 RPLP2P05387 115 aaKnown RBP23.74■■□□□ 1.39
HOMER3-204ENST00000539827 CARSP49589 748 aaKnown RBP23.74■■□□□ 1.39
HOMER3-204ENST00000539827 CBX1P83916 185 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 PTK7Q13308 1070 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 PPP1R26Q5T8A7 1209 aaPredicted RBP23.74■■□□□ 1.39
HOMER3-204ENST00000539827 LCLAT1Q6UWP7 414 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 ZBTB9Q96C00 473 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 PPP1R10Q96QC0 940 aaKnown RBP23.74■■□□□ 1.39
HOMER3-204ENST00000539827 GAD1Q99259 594 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 FAM49BQ9NUQ9 324 aa23.74■■□□□ 1.39
HOMER3-204ENST00000539827 A0A0U1RQG5 324 aaPredicted RBP23.73■■□□□ 1.39
HOMER3-204ENST00000539827 FGFR1P11362 822 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 TNFRSF8P28908 595 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 MLH1P40692 756 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 PDCLQ13371 301 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 CASP8Q14790 479 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 ZNF618Q5T7W0 954 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 XYLT1Q86Y38 959 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 RHOT1Q8IXI2 618 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 CCDC26Q8TAB7 109 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 JOSD2Q8TAC2 188 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 AENQ8WTP8 325 aaKnown RBP23.73■■□□□ 1.39
HOMER3-204ENST00000539827 DPEP3Q9H4B8 488 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 MIOSQ9NXC5 875 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 CACNG4Q9UBN1 327 aa23.73■■□□□ 1.39
HOMER3-204ENST00000539827 A8MXQ7 604 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 TTI1O43156 1089 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 MGEA5O60502 916 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 FKTNO75072 461 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 PDGFRBP09619 1106 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 MAN1A1P33908 653 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 PNPLA4P41247 253 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 AFF1P51825 1210 aaKnown RBP23.72■■□□□ 1.39
HOMER3-204ENST00000539827 PAK2Q13177 524 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 LPIN1Q14693 890 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 TRIM71Q2Q1W2 868 aaKnown RBP23.72■■□□□ 1.39
HOMER3-204ENST00000539827 SV2CQ496J9 727 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 PRELID2Q8N945 189 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 KBTBD7Q8WVZ9 684 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.72■■□□□ 1.39
HOMER3-204ENST00000539827 F8VP50 259 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 PIK3R2O00459 728 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 PFKMP08237 780 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 IGFBP6P24592 240 aaPredicted RBP23.72■■□□□ 1.39
HOMER3-204ENST00000539827 TAP1Q03518 808 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 HACE1Q8IYU2 909 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 ZNF296Q8WUU4 475 aaPredicted RBP23.72■■□□□ 1.39
HOMER3-204ENST00000539827 ST7Q9NRC1 585 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 GDAP2Q9NXN4 497 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 NFU1Q9UMS0 254 aa23.72■■□□□ 1.39
HOMER3-204ENST00000539827 CEP350Q5VT06 3117 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 SIGLEC16A6NMB1 481 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 PSTPIP1O43586 416 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 GNRH1P01148 92 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 KRT3P12035 628 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 TCF4P15884 667 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 HSPA6P17066 643 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 LRPAP1P30533 357 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 RFC1P35251 1148 aaPredicted RBP23.71■■□□□ 1.39
HOMER3-204ENST00000539827 ZNF268Q14587 947 aaPredicted RBP23.71■■□□□ 1.39
HOMER3-204ENST00000539827 LHX8Q68G74 356 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 UNC93AQ86WB7 457 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 GSTCDQ8NEC7 633 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 GLT1D1Q96MS3 346 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 HMX1Q9NP08 348 aaPredicted RBP23.71■■□□□ 1.39
HOMER3-204ENST00000539827 METTL5Q9NRN9 209 aaKnown RBP23.71■■□□□ 1.39
HOMER3-204ENST00000539827 PHF2O75151 1096 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 RARAP10276 462 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 LMO2P25791 158 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 GNL1P36915 607 aaPredicted RBP23.71■■□□□ 1.39
HOMER3-204ENST00000539827 LILRA4P59901 499 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 AGMOQ6ZNB7 445 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 SND1Q7KZF4 910 aaKnown RBP eCLIP23.71■■□□□ 1.39
HOMER3-204ENST00000539827 MAATS1Q7Z4T9 603 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 KRT222Q8N1A0 295 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 RNF169Q8NCN4 708 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 PLVAPQ9BX97 442 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 SNX25Q9H3E2 840 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 WDR35Q9P2L0 1181 aa23.71■■□□□ 1.39
HOMER3-204ENST00000539827 GABRB2P47870 512 aa23.7■■□□□ 1.38
HOMER3-204ENST00000539827 RGS7P49802 495 aa23.7■■□□□ 1.38
HOMER3-204ENST00000539827 STILQ15468 1287 aa23.7■■□□□ 1.38
HOMER3-204ENST00000539827 SIX1Q15475 284 aaPredicted RBP23.7■■□□□ 1.38
HOMER3-204ENST00000539827 ATP13A4Q4VNC1 1196 aa23.7■■□□□ 1.38
HOMER3-204ENST00000539827 TTC30AQ86WT1 665 aa23.7■■□□□ 1.38
HOMER3-204ENST00000539827 DDX42Q86XP3 938 aaKnown RBP eCLIP23.7■■□□□ 1.38
HOMER3-204ENST00000539827 APPL2Q8NEU8 664 aa23.7■■□□□ 1.38
HOMER3-204ENST00000539827 MAGOHBQ96A72 148 aaKnown RBP23.7■■□□□ 1.38
HOMER3-204ENST00000539827 HERPUD2Q9BSE4 406 aa23.7■■□□□ 1.38
HOMER3-204ENST00000539827 TRPV6Q9H1D0 765 aa23.7■■□□□ 1.38
HOMER3-204ENST00000539827 MOXD2PA6NHM9 499 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 TULP2O00295 520 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 PSMA2P25787 234 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms