RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 CUL2Q13617 745 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 KPNB1Q14974 876 aaKnown RBP21.34■■□□□ 1.01
TMEM260-203ENST00000539559 PGM5Q15124 567 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 ZACNQ401N2 412 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 TTC7BQ86TV6 843 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 FAM160B2Q86V87 743 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 RHPN2Q8IUC4 686 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 ENDOVQ8N8Q3 282 aaKnown RBP21.34■■□□□ 1.01
TMEM260-203ENST00000539559 FEM1BQ9UK73 627 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 NUB1Q9Y5A7 615 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 MYH9P35579 1960 aaKnown RBP21.34■■□□□ 1.01
TMEM260-203ENST00000539559 WDR64B1ANS9 1081 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 C2CD2LO14523 706 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 C4BPAP04003 597 aaKnown RBP21.34■■□□□ 1.01
TMEM260-203ENST00000539559 ASNSP08243 561 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 GTF2H1P32780 548 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 GEMIN4P57678 1058 aaKnown RBP21.34■■□□□ 1.01
TMEM260-203ENST00000539559 TNFAIP1Q13829 316 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 RCN1Q15293 331 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 HIF1AQ16665 826 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 SLC45A4Q5BKX6 768 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 TMEM154Q6P9G4 183 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 C4orf50Q6ZRC1 276 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 C3orf62Q6ZUJ4 267 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.34■■□□□ 1.01
TMEM260-203ENST00000539559 ZNF276Q8N554 614 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 NRG4Q8WWG1 115 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 PAFAH2Q99487 392 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 HAPLN2Q9GZV7 340 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 TBC1D22BQ9NU19 505 aa21.34■■□□□ 1.01
TMEM260-203ENST00000539559 SERPINB3P29508 390 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 CPA2P48052 419 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 RASSF2P50749 326 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 CCDC6Q16204 474 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 KCNT1Q5JUK3 1230 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 CYP4A22Q5TCH4 519 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 FYB2Q5VWT5 728 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 USP37Q86T82 979 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 ZNF677Q86XU0 584 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 RCOR2Q8IZ40 523 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 PYROXD1Q8WU10 500 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 KAT6AQ92794 2004 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 BRCA1P38398 1863 aaKnown RBP21.33■■□□□ 1.01
TMEM260-203ENST00000539559 LIN7AO14910 233 aaPredicted RBP21.33■■□□□ 1.01
TMEM260-203ENST00000539559 PTGER2P43116 358 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 LIG4P49917 911 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 VCPP55072 806 aaKnown RBP21.33■■□□□ 1.01
TMEM260-203ENST00000539559 LMNB2Q03252 620 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 MORF4L2Q15014 288 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 OASLQ15646 514 aaKnown RBP21.33■■□□□ 1.01
TMEM260-203ENST00000539559 OR5B17Q8NGF7 314 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 ZNF341Q9BYN7 854 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 XPNPEP1Q9NQW7 623 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 ANKFY1Q9P2R3 1169 aa21.33■■□□□ 1.01
TMEM260-203ENST00000539559 CETN2P41208 172 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 MXRA7P84157 204 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 CCDC142Q17RM4 750 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 BBS9Q3SYG4 887 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 ACSBG2Q5FVE4 666 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 WASHC2DQ5SRD0 308 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 LMNTD2Q8IXW0 634 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 WDR60Q8WVS4 1066 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 PARVAQ9NVD7 372 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 ARMCX1Q9P291 453 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 RFC5P40937 340 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 BPIFB4P59827 614 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 EFHC2Q5JST6 749 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 DCUN1D2Q6PH85 259 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 RINLQ6ZS11 566 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 FBXO36Q8NEA4 188 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 RMDN3Q96TC7 470 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 ZWILCHQ9H900 591 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 DLGAP2Q9P1A6 1054 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 SEPT9Q9UHD8 586 aaPredicted RBP21.32■■□□□ 1
TMEM260-203ENST00000539559 LTBP3Q9NS15 1303 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 hCG_1818297A0A087WSY0 165 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 TROVE2P10155 538 aaKnown RBP eCLIP21.32■■□□□ 1
TMEM260-203ENST00000539559 SWSAP1Q6NVH7 229 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 PHF13Q86YI8 300 aaPredicted RBP21.32■■□□□ 1
TMEM260-203ENST00000539559 ZNF606Q8WXB4 792 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 RBM41Q96IZ5 413 aaKnown RBP21.32■■□□□ 1
TMEM260-203ENST00000539559 FOXP3Q9BZS1 431 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 MANSC1Q9H8J5 431 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 ANKEF1Q9NU02 776 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 GINM1Q9NU53 330 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 SPATS2LQ9NUQ6 558 aaKnown RBP21.32■■□□□ 1
TMEM260-203ENST00000539559 SENP1Q9P0U3 644 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 IP6K2Q9UHH9 426 aa21.32■■□□□ 1
TMEM260-203ENST00000539559 TMEM191CA6NGB0 347 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 HAUS5O94927 633 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 TMEM191BP0C7N4 346 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 NEFHP12036 1026 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 BRD2P25440 801 aaKnown RBP21.31■■□□□ 1
TMEM260-203ENST00000539559 MCCD1P59942 119 aaPredicted RBP21.31■■□□□ 1
TMEM260-203ENST00000539559 SCYL3Q8IZE3 742 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 TEX9Q8N6V9 391 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 TTC17Q96AE7 1141 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 SCINQ9Y6U3 715 aa21.31■■□□□ 1
TMEM260-203ENST00000539559 TRAFD1O14545 582 aaPredicted RBP21.31■■□□□ 1
TMEM260-203ENST00000539559 ATP2A1O14983 1001 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms