RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 FAXDC2Q96IV6 333 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 AMFRQ9UKV5 643 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 NOD1Q9Y239 953 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 TRIM17Q9Y577 477 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 ALG6Q9Y672 507 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 TMEM110-MUSTN1A8MSY1 372 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 CABYRO75952 493 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 FSBPO95073 299 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 P4HA1P13674 534 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 ECHS1P30084 290 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 FNTAP49354 379 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 XKR4Q5GH76 650 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 LRIG3Q6UXM1 1119 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 MON1BQ7L1V2 547 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 NLRP14Q86W24 1093 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 GLT1D1Q96MS3 346 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 C11orf70Q9BRQ4 267 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 ELOVL4Q9GZR5 314 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 TMBIM4Q9HC24 238 aa18.09■□□□□ 0.49
PCDHB17P-201ENST00000539533 GOLGA6L10A6NI86 522 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 CILPO75339 1184 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 STAU1O95793 577 aaKnown RBP18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 CD19P15391 556 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 SEC24CP53992 1094 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 MYO1EQ12965 1108 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 CUL1Q13616 776 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 MESDQ14696 234 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 ARHGEF6Q15052 776 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 YTHDF3Q7Z739 585 aaKnown RBP18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 SLC4A11Q8NBS3 891 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 MYCBPAPQ8TBZ2 947 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 SH3TC2Q8TF17 1288 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 HES6Q96HZ4 224 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 PBKQ96KB5 322 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 CCT8L2Q96SF2 557 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 CYP3A43Q9HB55 503 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 GOLGA2P5Q9HBQ8 144 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 UBQLN1Q9UMX0 589 aaKnown RBP18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 MOXD2PA6NHM9 499 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 MTA2O94776 668 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 GHRP10912 638 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 CD52P31358 61 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 HSD17B3P37058 310 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 SOX4Q06945 474 aaPredicted RBP18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 C9orf57Q5W0N0 161 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 ZFP42Q96MM3 310 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 FAM105AQ9NUU6 356 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 SAGE1Q9NXZ1 904 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 ADAM22Q9P0K1 906 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 PADI3Q9ULW8 664 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 SNX9Q9Y5X1 595 aa18.08■□□□□ 0.48
PCDHB17P-201ENST00000539533 SRRM3A6NNA2 597 aaPredicted RBP18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 H0YHG0 523 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 CEP104O60308 925 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 KCNE1P15382 129 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 PTK7Q13308 1070 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 FBXO47Q5MNV8 452 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 CPNE8Q86YQ8 564 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 WDTC1Q8N5D0 677 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 ACTRT1Q8TDG2 376 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 TRIM7Q9C029 511 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 TRPV6Q9H1D0 765 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 UVRAGQ9P2Y5 699 aa18.07■□□□□ 0.48
PCDHB17P-201ENST00000539533 MYO1FO00160 1098 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 GPR182O15218 404 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 TLR3O15455 904 aaKnown RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 MYZAPP0CAP1 466 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 HPDP32754 393 aaPredicted RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 TRIM71Q2Q1W2 868 aaKnown RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 PHF13Q86YI8 300 aaPredicted RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 TMEM176AQ96HP8 235 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 CABS1Q96KC9 395 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 A0A1W2PQ45 241 aaPredicted RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 A0A1W2PQY0 241 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 H0YGN5 161 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 FAM107AO95990 144 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 MYCP01106 439 aaPredicted RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 RPLP2P05387 115 aaKnown RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 NDST1P52848 882 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 PTP4A2Q12974 167 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 UAP1Q16222 522 aaPredicted RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 ZNF618Q5T7W0 954 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 C11orf63Q6NUN7 778 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 ARFGAP2Q8N6H7 521 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 LPPQ93052 612 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 CENPHQ9H3R5 247 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 CHST12Q9NRB3 414 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 BARX2Q9UMQ3 279 aaPredicted RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 PCDHGC3Q9UN70 934 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 NFS1Q9Y697 457 aa18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 PDCD11Q14690 1871 aaKnown RBP18.06■□□□□ 0.48
PCDHB17P-201ENST00000539533 PIRO00625 290 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 PTGESO14684 152 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 DDX3YO15523 660 aaKnown RBP18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 PAEPP09466 180 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 COMTP21964 271 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 AFF1P51825 1210 aaKnown RBP18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 PTPN11Q06124 597 aaPredicted RBP18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 LPIN1Q14693 890 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 DENND1BQ6P3S1 775 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms