RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TGFB1I1O43294 461 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 LAMTOR5O43504 91 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 PRPF40AO75400 957 aaKnown RBP23.84■■□□□ 1.41
SCARB1-206ENST00000539320 PCSK1P29120 753 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 AFMP43652 599 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 RPS9P46781 194 aaKnown RBP23.84■■□□□ 1.41
SCARB1-206ENST00000539320 CYP2J2P51589 502 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 SNRPFP62306 86 aaKnown RBP23.84■■□□□ 1.41
SCARB1-206ENST00000539320 FCHO2Q0JRZ9 810 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 SNRNP35Q16560 246 aaKnown RBP23.84■■□□□ 1.41
SCARB1-206ENST00000539320 DUOXA2Q1HG44 320 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 BMT2Q1RMZ1 405 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 CEP57L1Q8IYX8 460 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 MAML2Q8IZL2 1156 aaPredicted RBP23.84■■□□□ 1.41
SCARB1-206ENST00000539320 PI4K2AQ9BTU6 479 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 SEMA4AQ9H3S1 761 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 ABCB6Q9NP58 842 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 RCOR1Q9UKL0 485 aa23.84■■□□□ 1.41
SCARB1-206ENST00000539320 NDRG2Q9UN36 371 aaKnown RBP23.84■■□□□ 1.41
SCARB1-206ENST00000539320 PVALEFA0A1B0GWK0 134 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 LHX1P48742 406 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 GPR15P49685 360 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 CUL4BQ13620 913 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 CSGALNACT1Q8TDX6 532 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 HPDLQ96IR7 371 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 PKMYT1Q99640 499 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 CGRRF1Q99675 332 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 OBP2AQ9NY56 170 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 FBXO4Q9UKT5 387 aa23.83■■□□□ 1.41
SCARB1-206ENST00000539320 GABRDO14764 452 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 CLIC2O15247 247 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 PRAMEF12O95522 483 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 DLATP10515 647 aaKnown RBP23.82■■□□□ 1.4
SCARB1-206ENST00000539320 WEE1P30291 646 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 PSMD6Q15008 389 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 SOWAHAQ2M3V2 549 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 GPIHBP1Q8IV16 184 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 GRAMD1CQ8IYS0 662 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 XXYLT1Q8NBI6 393 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 FAM3CQ92520 227 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 MSANTD3Q96H12 275 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 FNBP1Q96RU3 617 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 SLC39A2Q9NP94 309 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 SERTAD1Q9UHV2 236 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 ZMYM5Q9UJ78 669 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 GPR179Q6PRD1 2367 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 OTOGLQ3ZCN5 2332 aa23.82■■□□□ 1.4
SCARB1-206ENST00000539320 HCRTO43612 131 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 ACTN4O43707 911 aaKnown RBP23.81■■□□□ 1.4
SCARB1-206ENST00000539320 SLFN14P0C7P3 912 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 CSH1P0DML2 217 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 CSH2P0DML3 217 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 HMGA1P17096 107 aaKnown RBP23.81■■□□□ 1.4
SCARB1-206ENST00000539320 RPL10AP62906 217 aaKnown RBP23.81■■□□□ 1.4
SCARB1-206ENST00000539320 CYP24A1Q07973 514 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 CCDC142Q17RM4 750 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 ZNF528Q3MIS6 628 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 DPH6Q7L8W6 267 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 TRAPPC11Q7Z392 1133 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 C12orf56Q8IXR9 622 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 ZNF687Q8N1G0 1237 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 RDH13Q8NBN7 331 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 STKLD1Q8NE28 680 aa23.81■■□□□ 1.4
SCARB1-206ENST00000539320 CGNQ9P2M7 1197 aaKnown RBP23.81■■□□□ 1.4
SCARB1-206ENST00000539320 LMNAP02545 664 aaKnown RBP23.8■■□□□ 1.4
SCARB1-206ENST00000539320 TNNI1P19237 187 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 NLRP12P59046 1061 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 FZD5Q13467 585 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 ARHGAP29Q52LW3 1261 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 SDHAF4Q5VUM1 108 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 LIMS2Q7Z4I7 341 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 SPATA2LQ8IUW3 424 aaPredicted RBP23.8■■□□□ 1.4
SCARB1-206ENST00000539320 ADSSL1Q8N142 457 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 KBTBD7Q8WVZ9 684 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 FUBP3Q96I24 572 aaKnown RBP eCLIP23.8■■□□□ 1.4
SCARB1-206ENST00000539320 LRRC3BQ96PB8 259 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 SYT15Q9BQS2 421 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 CHRDQ9H2X0 955 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 C8orf33Q9H7E9 229 aaPredicted RBP23.8■■□□□ 1.4
SCARB1-206ENST00000539320 EXOC1Q9NV70 894 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 GTF3C4Q9UKN8 822 aa23.8■■□□□ 1.4
SCARB1-206ENST00000539320 CFAP54Q96N23 3096 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 CYP2F1P24903 491 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 DDX6P26196 483 aaKnown RBP eCLIP23.79■■□□□ 1.4
SCARB1-206ENST00000539320 MLLT6P55198 1093 aaPredicted RBP23.79■■□□□ 1.4
SCARB1-206ENST00000539320 DDR2Q16832 855 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 KNOP1Q1ED39 458 aaKnown RBP23.79■■□□□ 1.4
SCARB1-206ENST00000539320 CFAP221Q4G0U5 840 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 C1orf228Q6PIY5 440 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 TMEM150AQ86TG1 271 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 BPIFB1Q8TDL5 484 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 CCDC127Q96BQ5 260 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 IER2Q9BTL4 223 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 SLC46A2Q9BY10 475 aa23.79■■□□□ 1.4
SCARB1-206ENST00000539320 PRMT8Q9NR22 394 aaPredicted RBP23.79■■□□□ 1.4
SCARB1-206ENST00000539320 UXTQ9UBK9 157 aaPredicted RBP23.79■■□□□ 1.4
SCARB1-206ENST00000539320 MAGED2Q9UNF1 606 aaPredicted RBP23.79■■□□□ 1.4
SCARB1-206ENST00000539320 DENND4CQ5VZ89 1909 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 MYBPHLA2RUH7 354 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 SLC38A8A6NNN8 435 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms