RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 FOXN3O00409 490 aaPredicted RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 THAP12O43422 761 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 B4GALT3O60512 393 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 CXCL14O95715 111 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 ITGB1P05556 798 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 SRGAP2BP0DMP2 458 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 PTPN1P18031 435 aaKnown RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 GNA15P30679 374 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 HNRNPH3P31942 346 aaKnown RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 ELF1P32519 619 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 PBX3P40426 434 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 KLK7P49862 253 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 CDH8P55286 799 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 JAM2P57087 298 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 KRT83P78385 493 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 MRPL58Q14197 206 aaKnown RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 TDRD12Q587J7 1177 aaKnown RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 INTS6LQ5JSJ4 861 aaKnown RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 E4F1Q66K89 784 aaPredicted RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 SPATA2LQ8IUW3 424 aaPredicted RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 CCDC170Q8IYT3 715 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 B3GALNT2Q8NCR0 500 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 SPPL2BQ8TCT7 592 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 POF1BQ8WVV4 589 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 FUBP3Q96I24 572 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLPB-210ENST00000539148 FAM84AQ96KN4 292 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 CEP295NLQ96MC4 621 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 C16orf45Q96MC5 204 aaPredicted RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 KREMEN1Q96MU8 473 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 DNAJC7Q99615 494 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 TCF25Q9BQ70 676 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 MRPL45Q9BRJ2 306 aaKnown RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 C17orf80Q9BSJ5 609 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 ZNF518BQ9C0D4 1074 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 ELOVL4Q9GZR5 314 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 ABCB6Q9NP58 842 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 ABHD10Q9NUJ1 306 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 LMCD1Q9NZU5 365 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 CACNG4Q9UBN1 327 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 MTUS1Q9ULD2 1270 aa10.87□□□□□ -0.67
CLPB-210ENST00000539148 YBX2Q9Y2T7 364 aaKnown RBP10.87□□□□□ -0.67
CLPB-210ENST00000539148 COL6A3P12111 3177 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 UQCRHLA0A096LP55 91 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 I3L4J1 428 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 CYP26A1O43174 497 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 EFEMP2O95967 443 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 UQCRHP07919 91 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 PDGFRBP09619 1106 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 MYOGP15173 224 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 ACO1P21399 889 aaKnown RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 TNFAIP3P21580 790 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 CYLC1P35663 651 aaPredicted RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 PRKCIP41743 596 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 RAP1GAPP47736 663 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 TUFMP49411 452 aaKnown RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 RAD23BP54727 409 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 RPL10AP62906 217 aaKnown RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 ARID5AQ03989 594 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 GPR17Q13304 367 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 CNGA2Q16280 664 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 ZNF394Q53GI3 561 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 ZNF697Q5TEC3 545 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 KIAA0319Q5VV43 1072 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 FAM109BQ6ICB4 259 aaPredicted RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 SLC8B1Q6J4K2 584 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 GPR153Q6NV75 609 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 GJB7Q6PEY0 223 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 VSTM1Q6UX27 236 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 CD300LGQ6UXG3 332 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 ZNF662Q6ZS27 426 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 CCDC149Q6ZUS6 474 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 ACOT1Q86TX2 421 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 MRPL43Q8N983 215 aaKnown RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 LNX1Q8TBB1 728 aaPredicted RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 MYCBPAPQ8TBZ2 947 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 SPPL3Q8TCT6 385 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 KBTBD7Q8WVZ9 684 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 ARNTL2Q8WYA1 636 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 BAP1Q92560 729 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 CYFIP2Q96F07 1278 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 PPP1R13BQ96KQ4 1090 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 CCDC42Q96M95 316 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 CDCA3Q99618 268 aaPredicted RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 ARID3AQ99856 593 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 MED10Q9BTT4 135 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 ZBP1Q9H171 429 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 ALG13Q9NP73 1137 aaKnown RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 PPP2R2CQ9Y2T4 447 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 PCDHB5Q9Y5E4 795 aa10.86□□□□□ -0.67
CLPB-210ENST00000539148 TIMM13Q9Y5L4 95 aaPredicted RBP10.86□□□□□ -0.67
CLPB-210ENST00000539148 SSU72P8A0A1W2PR75 194 aa10.85□□□□□ -0.67
CLPB-210ENST00000539148 C2CD2LO14523 706 aa10.85□□□□□ -0.67
CLPB-210ENST00000539148 NCK2O43639 380 aa10.85□□□□□ -0.67
CLPB-210ENST00000539148 AKR1B10O60218 316 aa10.85□□□□□ -0.67
CLPB-210ENST00000539148 LSM8O95777 96 aaKnown RBP10.85□□□□□ -0.67
CLPB-210ENST00000539148 LINC00271P0C7V0 271 aa10.85□□□□□ -0.67
CLPB-210ENST00000539148 FAM200BP0CF97 657 aa10.85□□□□□ -0.67
CLPB-210ENST00000539148 SETSIPP0DME0 302 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms