RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 NOMO3P69849 1222 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 CENPCQ03188 943 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 TMEM240Q5SV17 173 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 ARHGAP17Q68EM7 881 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 FUT10Q6P4F1 479 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.35■□□□□ 0.21
VAMP1-207ENST00000539047 REXO1L1PQ8IX06 675 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 CRYBG2Q8N1P7 616 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 PHOSPHO2Q8TCD6 241 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 HERVK_113Q902F9 699 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 SECISBP2LQ93073 1101 aaKnown RBP16.35■□□□□ 0.21
VAMP1-207ENST00000539047 ZNF653Q96CK0 615 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 ZNF689Q96CS4 500 aaPredicted RBP16.35■□□□□ 0.21
VAMP1-207ENST00000539047 C16orf45Q96MC5 204 aaPredicted RBP16.35■□□□□ 0.21
VAMP1-207ENST00000539047 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.35■□□□□ 0.21
VAMP1-207ENST00000539047 MED10Q9BTT4 135 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 OXCT2Q9BYC2 517 aaPredicted RBP16.35■□□□□ 0.21
VAMP1-207ENST00000539047 ISCUQ9H1K1 167 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 LHX5Q9H2C1 402 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 SYNCQ9H7C4 482 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 FAM49BQ9NUQ9 324 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 MYO1AQ9UBC5 1043 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 STK39Q9UEW8 545 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 STRIP2Q9ULQ0 834 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 NENFQ9UMX5 172 aa16.35■□□□□ 0.21
VAMP1-207ENST00000539047 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 NLRC5Q86WI3 1866 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 H7C4K7 107 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 B4GALT3O60512 393 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 MICAL2O94851 1124 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 CYP1A1P04798 512 aaPredicted RBP16.34■□□□□ 0.21
VAMP1-207ENST00000539047 ITGB1P05556 798 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 SETSIPP0DME0 302 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 PTPN1P18031 435 aaKnown RBP16.34■□□□□ 0.21
VAMP1-207ENST00000539047 ABCB4P21439 1286 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 BCAT1P54687 386 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 GALCP54803 685 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 ZNF280DQ6N043 979 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 LCLAT1Q6UWP7 414 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 OSTM1Q86WC4 334 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 RHOT2Q8IXI1 618 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 FIBCD1Q8N539 461 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 TFAP2BQ92481 460 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 CYFIP2Q96F07 1278 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 TMEM169Q96HH4 297 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 PCDHB18PQ96TA0 734 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 ACBD6Q9BR61 282 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 TSPAN16Q9UKR8 245 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 INSL6Q9Y581 213 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 PCDHB12Q9Y5F1 795 aa16.34■□□□□ 0.21
VAMP1-207ENST00000539047 TIMM13Q9Y5L4 95 aaPredicted RBP16.34■□□□□ 0.21
VAMP1-207ENST00000539047 A0A0A6YYK5 440 aaPredicted RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 MACROD2A1Z1Q3 448 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 BTNL10A8MVZ5 291 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 GJB5O95377 273 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 UNGP13051 313 aaPredicted RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 ATP2A2P16615 1042 aaKnown RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 ACAT1P24752 427 aaKnown RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 CDH5P33151 784 aaPredicted RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 NOP2P46087 812 aaKnown RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 GPC5P78333 572 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 MDH1BQ5I0G3 518 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 FAM171A1Q5VUB5 890 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 KCNT2Q6UVM3 1135 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 ERICH1Q86X53 443 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 CEP57Q86XR8 500 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 PALB2Q86YC2 1186 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 DCP1BQ8IZD4 617 aaKnown RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 RNF10Q8N5U6 811 aaKnown RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 C1orf131Q8NDD1 294 aaKnown RBP16.33■□□□□ 0.2
VAMP1-207ENST00000539047 CPA5Q8WXQ8 436 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 RFFLQ8WZ73 363 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 VCPIP1Q96JH7 1222 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 ADAM22Q9P0K1 906 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 SCINQ9Y6U3 715 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 NCANO14594 1321 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 VWA8A3KMH1 1905 aa16.33■□□□□ 0.2
VAMP1-207ENST00000539047 LMO2P25791 158 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 ADORA2BP29275 332 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 TKTP29401 623 aaKnown RBP16.32■□□□□ 0.2
VAMP1-207ENST00000539047 SSTR3P32745 418 aaPredicted RBP16.32■□□□□ 0.2
VAMP1-207ENST00000539047 BST2Q10589 180 aaKnown RBP16.32■□□□□ 0.2
VAMP1-207ENST00000539047 INTS6LQ5JSJ4 861 aaKnown RBP16.32■□□□□ 0.2
VAMP1-207ENST00000539047 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
VAMP1-207ENST00000539047 KIAA1841Q6NSI8 718 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 DENND1BQ6P3S1 775 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 CD300LGQ6UXG3 332 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 CHRDL2Q6WN34 429 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 C4orf50Q6ZRC1 276 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 ANKS3Q6ZW76 656 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 C16orf59Q7L2K0 433 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 PHF13Q86YI8 300 aaPredicted RBP16.32■□□□□ 0.2
VAMP1-207ENST00000539047 HERC6Q8IVU3 1022 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 COLGALT1Q8NBJ5 622 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 OLIG1Q8TAK6 271 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 C11orf70Q9BRQ4 267 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 PACSIN1Q9BY11 444 aa16.32■□□□□ 0.2
VAMP1-207ENST00000539047 CWH43Q9H720 699 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms