RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 TRIML1Q8N9V2 468 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 DNAJC19Q96DA6 116 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 ZFYVE19Q96K21 471 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 PRIMPOLQ96LW4 560 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 ZNF512Q96ME7 567 aaPredicted RBP13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 MKNK1Q9BUB5 465 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 GPR88Q9GZN0 384 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 POLD4Q9HCU8 107 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 POLR3BQ9NW08 1133 aaPredicted RBP13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 DACH1Q9UI36 760 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 MAN1B1Q9UKM7 699 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 NAV2Q8IVL1 2488 aa13.52□□□□□ -0.25
CLSTN3-208ENST00000538933 MYO16Q9Y6X6 1858 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 CCDC169A6NNP5 214 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 SFI1A8K8P3 1242 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 TRAPPC3O43617 180 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 ZIC2O95409 532 aaPredicted RBP13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 CAVIN2O95810 425 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 EDN1P05305 212 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 PSMD2Q13200 908 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 FAM26FQ5R3K3 315 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 DAB2IPQ5VWQ8 1189 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 RBM43Q6ZSC3 357 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 SFR1Q86XK3 245 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 GPIHBP1Q8IV16 184 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 LEMD2Q8NC56 503 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 CHFRQ96EP1 664 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 C17orf75Q9HAS0 396 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 GOLGA2P5Q9HBQ8 144 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 GPRC5CQ9NQ84 441 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 ANO10Q9NW15 660 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 TBC1D7Q9P0N9 293 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 SEL1LQ9UBV2 794 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 FBXL5Q9UKA1 691 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 USP20Q9Y2K6 914 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 MSRB2Q9Y3D2 182 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 PI4KAP42356 2102 aa13.51□□□□□ -0.25
CLSTN3-208ENST00000538933 KIAA1549LQ6ZVL6 1849 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 LRRIQ4A6NIV6 560 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 K7ENM7 598 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 HYAL3O43820 417 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 KLRC4O43908 158 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 RHOBTB3O94955 611 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 KIF20AO95235 890 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 PRKCBP05771 671 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 PLS3P13797 630 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 ARPP19P56211 112 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 PEX3P56589 373 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 NLRP12P59046 1061 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 TYRO3Q06418 890 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 SOX4Q06945 474 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 TNK2Q07912 1038 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 TWF1Q12792 350 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 GLRA4Q5JXX5 417 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 STXBP5Q5T5C0 1151 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 NT5DC1Q5TFE4 455 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 EEF1DP3Q658K8 133 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 CDCA2Q69YH5 1023 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 IQCEQ6IPM2 695 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 TMC8Q8IU68 726 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 ARID3BQ8IVW6 561 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 YAF2Q8IY57 180 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 CAMKK1Q8N5S9 505 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 DEPTORQ8TB45 409 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 UROC1Q96N76 676 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 KMT5AQ9NQR1 393 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 ASAH2Q9NR71 780 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 PRMT7Q9NVM4 692 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 KLK13Q9UKR3 277 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 GPSM3Q9Y4H4 160 aa13.5□□□□□ -0.25
CLSTN3-208ENST00000538933 PTPRDP23468 1912 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 FAM221BA6H8Z2 402 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 H0YCG3 227 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 N4BP3O15049 544 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 DCLK1O15075 740 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 GCNT3O95395 438 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 VNN2O95498 520 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 PPP1R2P41236 205 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 CREB5Q02930 508 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 ARHGAP29Q52LW3 1261 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 TMEM196Q5HYL7 178 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 FSTL4Q6MZW2 842 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 ZBTB8OSQ8IWT0 167 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 SPATA20Q8TB22 786 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 TMEM9BQ9NQ34 198 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 AFF4Q9UHB7 1163 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 MAFFQ9ULX9 164 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 GDAQ9Y2T3 454 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 GON4LQ3T8J9 2241 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 DENND4CQ5VZ89 1909 aa13.49□□□□□ -0.25
CLSTN3-208ENST00000538933 ACACAQ13085 2346 aa13.48□□□□□ -0.25
CLSTN3-208ENST00000538933 TNRC6BQ9UPQ9 1833 aaKnown RBP13.48□□□□□ -0.25
CLSTN3-208ENST00000538933 SMIM28A0A1B0GU29 152 aa13.48□□□□□ -0.25
CLSTN3-208ENST00000538933 A0A1W2PRU2 124 aa13.48□□□□□ -0.25
CLSTN3-208ENST00000538933 FRMD3A2A2Y4 597 aa13.48□□□□□ -0.25
CLSTN3-208ENST00000538933 SYN3O14994 580 aa13.48□□□□□ -0.25
CLSTN3-208ENST00000538933 ABCD1P33897 745 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms