RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 WDR49Q8IV35 697 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 TMEM86AQ8N2M4 240 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 TOP6BLQ8N6T0 577 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 XXYLT1Q8NBI6 393 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 DNASE1L2Q92874 299 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 CCDC127Q96BQ5 260 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 HPDLQ96IR7 371 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 CGRRF1Q99675 332 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 MKNK1Q9BUB5 465 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 GZF1Q9H116 711 aaPredicted RBP16.07■□□□□ 0.16
RAB40B-202ENST00000538809 GDPD2Q9HCC8 539 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 LTB4R2Q9NPC1 389 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 EXOC1Q9NV70 894 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 R3HCC1Q9Y3T6 440 aaKnown RBP16.07■□□□□ 0.16
RAB40B-202ENST00000538809 ATG2BQ96BY7 2078 aa16.07■□□□□ 0.16
RAB40B-202ENST00000538809 ZFHX2Q9C0A1 2572 aaPredicted RBP16.06■□□□□ 0.16
RAB40B-202ENST00000538809 PRPF40AO75400 957 aaKnown RBP16.06■□□□□ 0.16
RAB40B-202ENST00000538809 TNNI1P19237 187 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 TARSP26639 723 aaKnown RBP16.06■□□□□ 0.16
RAB40B-202ENST00000538809 NBL1P41271 181 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 SYKP43405 635 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 SMARCB1Q12824 385 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 MYO1EQ12965 1108 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 PSMD6Q15008 389 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 TAF12Q16514 161 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 KNOP1Q1ED39 458 aaKnown RBP16.06■□□□□ 0.16
RAB40B-202ENST00000538809 KMT5BQ4FZB7 885 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 ARHGAP15Q53QZ3 475 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 FSIP1Q8NA03 581 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 DEPDC1BQ8WUY9 529 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 FNBP1Q96RU3 617 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 ACBD6Q9BR61 282 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 GPR88Q9GZN0 384 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 TRPV4Q9HBA0 871 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 IL21Q9HBE4 155 aa16.06■□□□□ 0.16
RAB40B-202ENST00000538809 CGNQ9P2M7 1197 aaKnown RBP16.06■□□□□ 0.16
RAB40B-202ENST00000538809 FAM186AA6NE01 2351 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 SHISA7A6NL88 538 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 FAM170BA6NMN3 283 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 PRAMEF12O95522 483 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 FGF19O95750 216 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 CYP2F1P24903 491 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 PSMC1P62191 440 aaKnown RBP16.05■□□□□ 0.16
RAB40B-202ENST00000538809 PSMD2Q13200 908 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 NFE2Q16621 373 aaPredicted RBP16.05■□□□□ 0.16
RAB40B-202ENST00000538809 KRBA2Q6ZNG9 492 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 ASCL5Q7RTU5 278 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 TRAPPC11Q7Z392 1133 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 ARID3BQ8IVW6 561 aaPredicted RBP16.05■□□□□ 0.16
RAB40B-202ENST00000538809 MFSD6LQ8IWD5 586 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 TMEM174Q8WUU8 243 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 KBTBD7Q8WVZ9 684 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 IRF7Q92985 503 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 GCNAQ96QF7 691 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 PKMYT1Q99640 499 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 GTF3C4Q9UKN8 822 aa16.05■□□□□ 0.16
RAB40B-202ENST00000538809 NDRG2Q9UN36 371 aaKnown RBP16.05■□□□□ 0.16
RAB40B-202ENST00000538809 DMDP11532 3685 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 PROB1E7EW31 1015 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 ZNF263O14978 683 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 EXOC3O60645 756 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 ATP2C2O75185 946 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 PCSK1P29120 753 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 CDC25CP30307 473 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 CASP4P49662 377 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 NUCB2P80303 420 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 DPYDQ12882 1025 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 DDR2Q16832 855 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 LIMS2Q7Z4I7 341 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 YAF2Q8IY57 180 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 PLEKHO2Q8TD55 490 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 MMS19Q96T76 1030 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 SYT15Q9BQS2 421 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 BCO2Q9BYV7 579 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 SMG9Q9H0W8 520 aaKnown RBP16.04■□□□□ 0.16
RAB40B-202ENST00000538809 KCTD10Q9H3F6 313 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 DMAC2Q9NW81 257 aa16.04■□□□□ 0.16
RAB40B-202ENST00000538809 MAGED2Q9UNF1 606 aaPredicted RBP16.04■□□□□ 0.16
RAB40B-202ENST00000538809 KIAA1549LQ6ZVL6 1849 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 RIF1Q5UIP0 2472 aaKnown RBP16.03■□□□□ 0.16
RAB40B-202ENST00000538809 MYBPHLA2RUH7 354 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 PRR23AA6NEV1 266 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 DPYSL4O14531 572 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 GABRDO14764 452 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 RHOBTB3O94955 611 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 CST3P01034 146 aaPredicted RBP16.03■□□□□ 0.16
RAB40B-202ENST00000538809 RPN1P04843 607 aaKnown RBP16.03■□□□□ 0.16
RAB40B-202ENST00000538809 HMGA1P17096 107 aaKnown RBP16.03■□□□□ 0.16
RAB40B-202ENST00000538809 LMO2P25791 158 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 LHX1P48742 406 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 ZNF852Q6ZMS4 543 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 TMEM150AQ86TG1 271 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 SPATA2LQ8IUW3 424 aaPredicted RBP16.03■□□□□ 0.16
RAB40B-202ENST00000538809 C1orf210Q8IVY1 113 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 SPATA18Q8TC71 538 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 ZNF516Q92618 1163 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 ZFYVE19Q96K21 471 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 LRRC3BQ96PB8 259 aa16.03■□□□□ 0.16
RAB40B-202ENST00000538809 TASP1Q9H6P5 420 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms