RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 FOXN3O00409 490 aaPredicted RBP18.35■□□□□ 0.53
CLN6-202ENST00000538696 C2CD2LO14523 706 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 ZNF263O14978 683 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 LILRB3O75022 631 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 CILPO75339 1184 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 MFAP3P55082 362 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 PSMD5Q16401 504 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 HABP4Q5JVS0 413 aaKnown RBP18.35■□□□□ 0.53
CLN6-202ENST00000538696 PLPP4Q5VZY2 271 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 ZNF280DQ6N043 979 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 KIAA1841Q6NSI8 718 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 NYAP1Q6ZVC0 841 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 ANKS3Q6ZW76 656 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 ENOSF1Q7L5Y1 443 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 ZNF571Q7Z3V5 609 aaPredicted RBP18.35■□□□□ 0.53
CLN6-202ENST00000538696 OR6B3Q8NGW1 331 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 OR10T2Q8NGX3 314 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 SHC3Q92529 594 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 FAM81BQ96LP2 452 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 C16orf45Q96MC5 204 aaPredicted RBP18.35■□□□□ 0.53
CLN6-202ENST00000538696 TWNKQ96RR1 684 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 LMAN2LQ9H0V9 348 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 ENTPD7Q9NQZ7 604 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 CISHQ9NSE2 258 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 DDX43Q9NXZ2 648 aaKnown RBP18.35■□□□□ 0.53
CLN6-202ENST00000538696 MTRRQ9UBK8 725 aa18.35■□□□□ 0.53
CLN6-202ENST00000538696 AKR1B10O60218 316 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 TBC1D4O60343 1298 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 ACAT1P24752 427 aaKnown RBP18.34■□□□□ 0.53
CLN6-202ENST00000538696 LMO2P25791 158 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 LHX1P48742 406 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 CYP27A1Q02318 531 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 CTXN3Q4LDR2 81 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 ZNF697Q5TEC3 545 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 RSPO2Q6UXX9 243 aaPredicted RBP18.34■□□□□ 0.53
CLN6-202ENST00000538696 TMC7Q7Z402 723 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 GPR65Q8IYL9 337 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 OLIG1Q8TAK6 271 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 WHAMMQ8TF30 809 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 TMEM209Q96SK2 561 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 SNX25Q9H3E2 840 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 FAM124BQ9H5Z6 455 aaPredicted RBP18.34■□□□□ 0.53
CLN6-202ENST00000538696 MRPL17Q9NRX2 175 aaKnown RBP18.34■□□□□ 0.53
CLN6-202ENST00000538696 BARX2Q9UMQ3 279 aaPredicted RBP18.34■□□□□ 0.53
CLN6-202ENST00000538696 STXBP5LQ9Y2K9 1186 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 BACE2Q9Y5Z0 518 aa18.34■□□□□ 0.53
CLN6-202ENST00000538696 A8MXQ7 604 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 H7C4K7 107 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 LCA5LO95447 670 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 RPL17P18621 184 aaKnown RBP18.33■□□□□ 0.53
CLN6-202ENST00000538696 GNL1P36915 607 aaPredicted RBP18.33■□□□□ 0.53
CLN6-202ENST00000538696 ARHGAP25P42331 645 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 NDST1P52848 882 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 YWHAEP62258 255 aaKnown RBP18.33■□□□□ 0.53
CLN6-202ENST00000538696 PTK2Q05397 1052 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 ORC1Q13415 861 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 SMC1AQ14683 1233 aaKnown RBP18.33■□□□□ 0.53
CLN6-202ENST00000538696 JAKMIP2Q96AA8 810 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 ELOVL4Q9GZR5 314 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 DPEP3Q9H4B8 488 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 PRDM12Q9H4Q4 367 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 RXFP1Q9HBX9 757 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 PCDHB4Q9Y5E5 795 aa18.33■□□□□ 0.53
CLN6-202ENST00000538696 BZW2Q9Y6E2 419 aaKnown RBP18.33■□□□□ 0.53
CLN6-202ENST00000538696 MTCL1Q9Y4B5 1905 aaKnown RBP18.32■□□□□ 0.52
CLN6-202ENST00000538696 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.32■□□□□ 0.52
CLN6-202ENST00000538696 GOLGA6L9A6NEM1 432 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 C2orf71A6NGG8 1288 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 OR6C75A6NL08 312 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 HIDE1A8MVS5 230 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 ADAM12O43184 909 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 CXCL14O95715 111 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 PDGFRBP09619 1106 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 CA8P35219 290 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 USP8P40818 1118 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 KRT83P78385 493 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 GFPT1Q06210 699 aaPredicted RBP18.32■□□□□ 0.52
CLN6-202ENST00000538696 GRIN2CQ14957 1233 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 CCDC142Q17RM4 750 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 INTS6LQ5JSJ4 861 aaKnown RBP18.32■□□□□ 0.52
CLN6-202ENST00000538696 UNC93AQ86WB7 457 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 FAM71AQ8IYT1 594 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 THEM5Q8N1Q8 247 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 TTC39CQ8N584 583 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 SYT15Q9BQS2 421 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 CLSTN3Q9BQT9 956 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 SYT11Q9BT88 431 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 NGRNQ9NPE2 291 aaKnown RBP18.32■□□□□ 0.52
CLN6-202ENST00000538696 TFR2Q9UP52 801 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 CNTN6Q9UQ52 1028 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 SSX2IPQ9Y2D8 614 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 IRAK3Q9Y616 596 aa18.32■□□□□ 0.52
CLN6-202ENST00000538696 RCCD1A6NED2 376 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 IPO7O95373 1038 aaKnown RBP18.31■□□□□ 0.52
CLN6-202ENST00000538696 OR4Q2P0C623 313 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 TNNT1P13805 278 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 PCSK1P29120 753 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 ZNF132P52740 706 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 PSMC1P62191 440 aaKnown RBP18.31■□□□□ 0.52
CLN6-202ENST00000538696 CREMQ03060 361 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms