RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SSTR1P30872 391 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 DNAL1Q4LDG9 190 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 C2CD6Q53TS8 623 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 CFAP157Q5JU67 520 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 TMCO4Q5TGY1 634 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 MON1BQ7L1V2 547 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 TRIM74Q86UV6 250 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 TRIM73Q86UV7 250 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 ZNF677Q86XU0 584 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 CBWD2Q8IUF1 395 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 TAS1R2Q8TE23 839 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 PYROXD1Q8WU10 500 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 NAT14Q8WUY8 206 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 CCDC127Q96BQ5 260 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 TTC1Q99614 292 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 ZDHHC7Q9NXF8 308 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 GGA1Q9UJY5 639 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 BANF1O75531 89 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 CALCAP01258 141 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 PIM1P11309 404 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 ENOSF1Q7L5Y1 443 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 ADGRG6Q86SQ4 1221 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 NLRX1Q86UT6 975 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 ALYREFQ86V81 257 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 DCAKDQ8WVC6 231 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 HIC2Q96JB3 615 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 UNC45AQ9H3U1 944 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 PCDH9Q9HC56 1237 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 MRPL47Q9HD33 250 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 SLC7A8Q9UHI5 535 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 ZNF831Q5JPB2 1677 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 BAG2O95816 211 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 IMPDH2P12268 514 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 KRT10P13645 584 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 ETS2P15036 469 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 GCNT1Q02742 428 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 MAP3K10Q02779 954 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 MAP7Q14244 749 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 MYBPC3Q14896 1274 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 LIN9Q5TKA1 542 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 KAZNQ674X7 775 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 CCDC174Q6PII3 467 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 RCOR2Q8IZ40 523 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 FBXO27Q8NI29 283 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 EBF3Q9H4W6 596 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 KCNK4Q9NYG8 393 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 USTQ9Y2C2 406 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 FAM237BA0A1B0GVD1 139 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 KLF11O14901 512 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 BUD23O43709 281 aaKnown RBP19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 FKBP6O75344 327 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 SERPINB2P05120 415 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 ENO1P06733 434 aaKnown RBP19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 BGNP21810 368 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 GTF2BQ00403 316 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 USP4Q13107 963 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 IKQ13123 557 aaPredicted RBP19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 C1orf146Q5VVC0 180 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 C3orf62Q6ZUJ4 267 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 PPM1HQ9ULR3 514 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 PCDHB2Q9Y5E7 798 aa19.5■□□□□ 0.71
SFSWAP-207ENST00000538548 MT-ND3P03897 115 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 VCPP55072 806 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 OASLQ15646 514 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 HAUS6Q7Z4H7 955 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 PCGF5Q86SE9 256 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 TREML1Q86YW5 311 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 OR6Y1Q8NGX8 325 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 APOPT1Q96IL0 206 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 SLITRK1Q96PX8 696 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 GALNT8Q9NY28 637 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 STRIP2Q9ULQ0 834 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 FARP1Q9Y4F1 1045 aaPredicted RBP19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 LY75O60449 1722 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 SMIM31A0A1B0GVY4 71 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 GOLGA8SH3BPF8 625 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 GOLGA8MH3BSY2 632 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 IPO5O00410 1097 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 ATF7P17544 494 aaPredicted RBP19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 MAMLD1Q13495 774 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 PDSS2Q86YH6 399 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 TTC17Q96AE7 1141 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 MTBPQ96DY7 904 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 FAM111AQ96PZ2 611 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 CYTH2Q99418 400 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 THTPAQ9BU02 230 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 PREBQ9HCU5 417 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 KLHL11Q9NVR0 708 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 TAGLN3Q9UI15 199 aa19.49■□□□□ 0.71
SFSWAP-207ENST00000538548 SPECC1L-ADORA2AF8WAN1 911 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 PI4K2BG5E9Z4 385 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 ITGAVP06756 1048 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 SLURP2P0DP57 97 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 GRM2Q14416 872 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 CIAPIN1Q6FI81 312 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 AAGABQ6PD74 315 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 KYAT3Q6YP21 454 aaKnown RBP19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 SPATA24Q86W54 205 aa19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 NKD2Q969F2 451 aaPredicted RBP19.48■□□□□ 0.71
SFSWAP-207ENST00000538548 CLPTM1LQ96KA5 538 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms