RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SMYD3Q9H7B4 428 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 SAYSD1Q9NPB0 183 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 TNFSF13BQ9Y275 285 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 LACTBL1A8MY62 500 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 DNM1LO00429 736 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 ITGB3P05106 788 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 ATP5DP30049 168 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 CCDC197Q8NCU1 140 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 TWNKQ96RR1 684 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 ELAC2Q9BQ52 826 aaKnown RBP26.25■■□□□ 1.79
RAB40C-204ENST00000538492 CCDC134Q9H6E4 229 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 IFT122Q9HBG6 1241 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 STRIP2Q9ULQ0 834 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 SBF1O95248 1867 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 DNALI1O14645 258 aaPredicted RBP26.25■■□□□ 1.79
RAB40C-204ENST00000538492 IFNB1P01574 187 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 SLC26A2P50443 739 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 RAD23BP54727 409 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 PSMC1P62191 440 aaKnown RBP26.25■■□□□ 1.79
RAB40C-204ENST00000538492 YWHAEP62258 255 aaKnown RBP26.25■■□□□ 1.79
RAB40C-204ENST00000538492 TTLL4Q14679 1199 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 NIPA2Q8N8Q9 360 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 OPTNQ96CV9 577 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 CPXM1Q96SM3 734 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 SYNCQ9H7C4 482 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 NAALADL1Q9UQQ1 740 aa26.25■■□□□ 1.79
RAB40C-204ENST00000538492 C22orf31O95567 290 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 STAG3L1P0CL83 205 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 COPS2P61201 443 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 MOGSQ13724 837 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 JADE1Q6IE81 842 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 ARFGAP1Q8N6T3 406 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 CPB2Q96IY4 423 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 DDX56Q9NY93 547 aaKnown RBP26.24■■□□□ 1.79
RAB40C-204ENST00000538492 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.24■■□□□ 1.79
RAB40C-204ENST00000538492 INSRRP14616 1297 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 IL1R2P27930 398 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 DRICH1Q6PGQ1 229 aaPredicted RBP26.24■■□□□ 1.79
RAB40C-204ENST00000538492 KIAA0319LQ8IZA0 1049 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 C10orf88Q9H8K7 445 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 EFCC1Q9HA90 598 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 ERAP1Q9NZ08 941 aa26.24■■□□□ 1.79
RAB40C-204ENST00000538492 A0A087WZ62 844 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 SGK1O00141 431 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 ASAP2O43150 1006 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 GH1P01241 217 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 BRAFP15056 766 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 PECAM1P16284 738 aaPredicted RBP26.23■■□□□ 1.79
RAB40C-204ENST00000538492 POLR2BP30876 1174 aaKnown RBP26.23■■□□□ 1.79
RAB40C-204ENST00000538492 VCPP55072 806 aaKnown RBP26.23■■□□□ 1.79
RAB40C-204ENST00000538492 MPP2Q14168 576 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 FASTKD3Q14CZ7 662 aaKnown RBP26.23■■□□□ 1.79
RAB40C-204ENST00000538492 OASLQ15646 514 aaKnown RBP26.23■■□□□ 1.79
RAB40C-204ENST00000538492 ANKRD20A8PQ5CZ79 823 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 SRRM1Q8IYB3 904 aaKnown RBP26.23■■□□□ 1.79
RAB40C-204ENST00000538492 CDCA5Q96FF9 252 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 FDXACB1Q9BRP7 624 aaPredicted RBP26.23■■□□□ 1.79
RAB40C-204ENST00000538492 BCO2Q9BYV7 579 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 KCNH4Q9UQ05 1017 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 MED7O43513 233 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 LRCH4O75427 683 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 TCEA3O75764 348 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 IL18RAPO95256 599 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 CAPN12Q6ZSI9 719 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 DPH6Q7L8W6 267 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 PIGWQ7Z7B1 504 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 GDAP1Q8TB36 358 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 CCHCR1Q8TD31 782 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 METTL5Q9NRN9 209 aaKnown RBP26.23■■□□□ 1.79
RAB40C-204ENST00000538492 SAMD15Q9P1V8 674 aa26.23■■□□□ 1.79
RAB40C-204ENST00000538492 SIGLEC16A6NMB1 481 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 SLC25A11Q02978 314 aaKnown RBP26.22■■□□□ 1.79
RAB40C-204ENST00000538492 RELL1Q8IUW5 271 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 CNPY4Q8N129 248 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 SLC4A11Q8NBS3 891 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 LHX5Q9H2C1 402 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 RNF181Q9P0P0 153 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 TPX2Q9ULW0 747 aaKnown RBP26.22■■□□□ 1.79
RAB40C-204ENST00000538492 C3orf70A6NLC5 250 aaPredicted RBP26.22■■□□□ 1.79
RAB40C-204ENST00000538492 CDH16O75309 829 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 ERBB2P04626 1255 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 OSBPP22059 807 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 ANKS4BQ8N8V4 417 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 CCT6BQ92526 530 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 CCDC77Q9BR77 488 aa26.22■■□□□ 1.79
RAB40C-204ENST00000538492 PRMT7Q9NVM4 692 aaPredicted RBP26.22■■□□□ 1.79
RAB40C-204ENST00000538492 VTNP04004 478 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 PPIL2Q13356 520 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 PCSK1NQ9UHG2 260 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 AKT3Q9Y243 479 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 DRG1Q9Y295 367 aaKnown RBP26.21■■□□□ 1.79
RAB40C-204ENST00000538492 TCP11X1B4DZS4 312 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 CYP2C8P10632 490 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 PTPN7P35236 360 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 PHKA2P46019 1235 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 STAT4Q14765 748 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 ARMCX2Q7L311 632 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 ELOVL4Q9GZR5 314 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 MROH8Q9H579 483 aa26.21■■□□□ 1.79
RAB40C-204ENST00000538492 CD48P09326 243 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms