RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 INTS6LQ5JSJ4 861 aaKnown RBP9.3□□□□□ -0.92
DDB1-212ENST00000538470 FAM173BQ6P4H8 233 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 CNNM4Q6P4Q7 775 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 KIAA2013Q8IYS2 634 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 SYNPOQ8N3V7 929 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 SPEM1Q8N4L4 309 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 TOP6BLQ8N6T0 577 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 CELF5Q8N6W0 485 aaKnown RBP9.3□□□□□ -0.92
DDB1-212ENST00000538470 LINC00301Q8NCQ3 95 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 MRPS31Q92665 395 aaKnown RBP9.3□□□□□ -0.92
DDB1-212ENST00000538470 TRMT2BQ96GJ1 504 aaKnown RBP9.3□□□□□ -0.92
DDB1-212ENST00000538470 FUBP3Q96I24 572 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDB1-212ENST00000538470 ANKRD36BP1Q96IX9 119 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 CBWD1Q9BRT8 395 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 IKZF4Q9H2S9 585 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 LMAN1LQ9HAT1 526 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 MAGEF1Q9HAY2 307 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 TBC1D7Q9P0N9 293 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 GMEB2Q9UKD1 530 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 RAB23Q9ULC3 237 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 L1RE1Q9UN81 338 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 AGAP1Q9UPQ3 857 aa9.3□□□□□ -0.92
DDB1-212ENST00000538470 A0A087X0B3 334 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 SPTLC2O15270 562 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 NOL4O94818 638 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 YEATS4O95619 227 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 TNNC2P02585 160 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 HMGA1P17096 107 aaKnown RBP9.29□□□□□ -0.92
DDB1-212ENST00000538470 CNR2P34972 360 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 AVPR1AP37288 418 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 CXCL12P48061 93 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 LHX1P48742 406 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 WNT7BP56706 349 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 NLRP12P59046 1061 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 RPL10AP62906 217 aaKnown RBP9.29□□□□□ -0.92
DDB1-212ENST00000538470 RBP5P82980 135 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 AMPD3Q01432 767 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 LMNB2Q03252 620 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 MYO1EQ12965 1108 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 ZNF268Q14587 947 aaPredicted RBP9.29□□□□□ -0.92
DDB1-212ENST00000538470 E2F4Q16254 413 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 ITPRIPL2Q3MIP1 535 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 CFAP221Q4G0U5 840 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 LAIR1Q6GTX8 287 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 TSSK4Q6SA08 328 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 DPH6Q7L8W6 267 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 LRRTM3Q86VH5 581 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 WDR49Q8IV35 697 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 ADGRF2Q8IZF7 708 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 CMTM8Q8IZV2 173 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 PDILTQ8N807 584 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 CXorf38Q8TB03 319 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 GIPC2Q8TF65 315 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 RMDN1Q96DB5 314 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 CEP295NLQ96MC4 621 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 ZNF396Q96N95 335 aaPredicted RBP9.29□□□□□ -0.92
DDB1-212ENST00000538470 PKMYT1Q99640 499 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 TRIM9Q9C026 710 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 MTMR12Q9C0I1 747 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 KIAA1586Q9HCI6 787 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 KBTBD4Q9NVX7 518 aa9.29□□□□□ -0.92
DDB1-212ENST00000538470 DDX43Q9NXZ2 648 aaKnown RBP9.29□□□□□ -0.92
DDB1-212ENST00000538470 R3HCC1Q9Y3T6 440 aaKnown RBP9.29□□□□□ -0.92
DDB1-212ENST00000538470 DNAH14Q0VDD8 3507 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 NCOR2Q9Y618 2525 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 GOLGA8IPA6NC78 632 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 ZNF233A6NK53 670 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 GOLGA8JA6NMD2 632 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 GABRDO14764 452 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 CUTAO60888 179 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 LRP3O75074 770 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 PRPF40AO75400 957 aaKnown RBP9.28□□□□□ -0.92
DDB1-212ENST00000538470 PRPF6O94906 941 aaKnown RBP9.28□□□□□ -0.92
DDB1-212ENST00000538470 F11P03951 625 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 KRT19P08727 400 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 HOXA6P31267 233 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 MAGEA11P43364 429 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 SOX9P48436 509 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 SNRPFP62306 86 aaKnown RBP9.28□□□□□ -0.92
DDB1-212ENST00000538470 AMPD2Q01433 879 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 CCINQ13939 588 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 MAPRE1Q15691 268 aaKnown RBP9.28□□□□□ -0.92
DDB1-212ENST00000538470 C4orf50Q6ZRC1 276 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 DGLUCYQ7Z3D6 616 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 LIMS2Q7Z4I7 341 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 TMEM150AQ86TG1 271 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 CSGALNACT2Q8N6G5 542 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 ZSWIM2Q8NEG5 633 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 EXOC4Q96A65 974 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 ZFYVE19Q96K21 471 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 MYRFLQ96LU7 910 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 LRRC3BQ96PB8 259 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 SLC46A2Q9BY10 475 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 FGFBP2Q9BYJ0 223 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 PDE11AQ9HCR9 933 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 TDP1Q9NUW8 608 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 TMLHEQ9NVH6 421 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 INTS13Q9NVM9 706 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 DLL3Q9NYJ7 618 aa9.28□□□□□ -0.92
DDB1-212ENST00000538470 GTSE1Q9NYZ3 720 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms