RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 PDIA5Q14554 519 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 KIR3DS1Q14943 382 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 PTPAQ15257 358 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 EPHA7Q15375 998 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 XKR3Q5GH77 459 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 IQCEQ6IPM2 695 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 CCSAPQ6IQ19 270 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 NFRKBQ6P4R8 1299 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 ABHD15Q6UXT9 468 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 OTUD6AQ7L8S5 288 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 PLPPR4Q7Z2D5 763 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 GAS2L3Q86XJ1 694 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 C4orf32Q8N8J7 132 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 IGSF22Q8N9C0 903 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 TMEM145Q8NBT3 493 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 LINC00301Q8NCQ3 95 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 AFAP1L1Q8TED9 768 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 DIS3LQ8TF46 1054 aaKnown RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 ATP8B4Q8TF62 1192 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 FRS2Q8WU20 508 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 LEO1Q8WVC0 666 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 CALML4Q96GE6 196 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 MRFAP1L1Q96HT8 127 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 PAWRQ96IZ0 340 aaKnown RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 EIF2AK1Q9BQI3 630 aaKnown RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 PLCD4Q9BRC7 762 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 HTATIP2Q9BUP3 242 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 SEZ6LQ9BYH1 1024 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 RNF32Q9H0A6 362 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 NT5C3AQ9H0P0 336 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 TUFT1Q9NNX1 390 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 RGL1Q9NZL6 768 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 FBXO2Q9UK22 296 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 ACSL6Q9UKU0 697 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 SRPRBQ9Y5M8 271 aaKnown RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 MORC2Q9Y6X9 1032 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 MYH9P35579 1960 aaKnown RBP4.76□□□□□ -1.65
SNHG1-208ENST00000538266 NRCAMQ92823 1304 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 KIAA0100Q14667 2235 aaKnown RBP4.76□□□□□ -1.65
SNHG1-208ENST00000538266 IGKV6D-21A0A0A0MT36 114 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 A0A1W2PQJ5 194 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 C17orf102A2RUQ5 167 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 ARHGEF35A5YM69 484 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 ZNF503-AS2A6NEH8 195 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 RRN3P2A6NIE6 340 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 PP2D1A8MPX8 630 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 ARVCFO00192 962 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 HAS3O00219 553 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 ARNTLO00327 626 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 SLC26A4O43511 780 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 HBP1O60381 514 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 DLX3O60479 287 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 PQBP1O60828 265 aaKnown RBP4.76□□□□□ -1.65
SNHG1-208ENST00000538266 OFD1O75665 1012 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 FAM153BP0C7A2 387 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 SMIM10L2AP0DMW4 78 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 SMIM10L2BP0DMW5 78 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 COL6A1P12109 1028 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 INSRRP14616 1297 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 MUTP22033 750 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 RPA1P27694 616 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CDC25AP30304 524 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 POLGP54098 1239 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-208ENST00000538266 GFRA1P56159 465 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 IGBP1P78318 339 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CYP4F8P98187 520 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 MVKQ03426 396 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CTTNQ14247 550 aaKnown RBP4.76□□□□□ -1.65
SNHG1-208ENST00000538266 PLCB4Q15147 1175 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 IL17AQ16552 155 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 PTGISQ16647 500 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 UGCGQ16739 394 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 PRSS53Q2L4Q9 553 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 ZSCAN23Q3MJ62 389 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 SPECC1Q5M775 1068 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 YOD1Q5VVQ6 348 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-208ENST00000538266 MPZL3Q6UWV2 235 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 B3GNT9Q6UX72 402 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 SLC39A5Q6ZMH5 540 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CCDC73Q6ZRK6 1079 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 RSPH3Q86UC2 560 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CABP7Q86V35 215 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CATSPER3Q86XQ3 398 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 SCUBE1Q8IWY4 988 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 C4orf19Q8IY42 314 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 EXOC8Q8IYI6 725 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 LILRB2Q8N423 598 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 METTL13Q8N6R0 699 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 KREMEN2Q8NCW0 462 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 NUP43Q8NFH3 380 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 LMBR1Q8WVP7 490 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 KCTD13Q8WZ19 329 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 KAT2BQ92831 832 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 LIN37Q96GY3 246 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CCDC34Q96HJ3 373 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 DYDC2Q96IM9 177 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CHAMP1Q96JM3 812 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CEP170P1Q96L14 293 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 CLIC6Q96NY7 704 aa4.76□□□□□ -1.65
SNHG1-208ENST00000538266 MAP7D2Q96T17 732 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms