RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 MZF1P28698 734 aaPredicted RBP11.2□□□□□ -0.62
RTN3-208ENST00000537981 CIITAP33076 1130 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 BCAP31P51572 246 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 EPHB1P54762 984 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 DYNLL1P63167 89 aaKnown RBP11.2□□□□□ -0.62
RTN3-208ENST00000537981 AMPD3Q01432 767 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 SPDYAQ5MJ70 313 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 TMEM164Q5U3C3 297 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 POTEHQ6S545 545 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 SEPT12Q8IYM1 358 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 CCDC110Q8TBZ0 833 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 HSPH1Q92598 858 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 OXNAD1Q96HP4 312 aaPredicted RBP11.2□□□□□ -0.62
RTN3-208ENST00000537981 DRC3Q9H069 523 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 KCTD10Q9H3F6 313 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 GCNT4Q9P109 453 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 GSTTP1A0A1W2PQM5 241 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 POTEFA5A3E0 1075 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 BIRC5O15392 142 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 CYTH3O43739 400 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 TCEA3O75764 348 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 ZBED1O96006 694 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 TMEM253P0C7T8 217 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 POTEIP0CG38 1075 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 THRAP10827 490 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 TCEA1P23193 301 aaKnown RBP11.2□□□□□ -0.62
RTN3-208ENST00000537981 UBAP2LQ14157 1087 aaKnown RBP11.2□□□□□ -0.62
RTN3-208ENST00000537981 EPHA7Q15375 998 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 TRMT5Q32P41 509 aaKnown RBP11.2□□□□□ -0.62
RTN3-208ENST00000537981 C6orf52Q5T4I8 152 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 POTEEQ6S8J3 1075 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 PACS1Q6VY07 963 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 DCDC5Q6ZRR9 648 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
RTN3-208ENST00000537981 SLC39A13Q96H72 371 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 MAELQ96JY0 434 aaKnown RBP11.2□□□□□ -0.62
RTN3-208ENST00000537981 ZBTB21Q9ULJ3 1066 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 ANKRD36CQ5JPF3 1778 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 EMSYQ7Z589 1322 aa11.2□□□□□ -0.62
RTN3-208ENST00000537981 CAPN14A8MX76 684 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 SLC37A4O43826 429 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 MAGEC1O60732 1142 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 HNRNPCL1O60812 293 aaKnown RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 RAG1P15918 1043 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 NR2F2P24468 414 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 DNAJA1P31689 397 aaKnown RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 PPP2R5BQ15173 497 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 PPP2R5EQ16537 467 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 FAM98CQ17RN3 349 aaKnown RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 TCHHL1Q5QJ38 904 aaPredicted RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 FAM26FQ5R3K3 315 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 CES4AQ5XG92 561 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 NANOGP8Q6NSW7 305 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 NSMFQ6X4W1 530 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.19□□□□□ -0.62
RTN3-208ENST00000537981 GLIS1Q8NBF1 620 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 TCP10LQ8TDR4 215 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 CEP63Q96MT8 703 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 NACAP1Q9BZK3 213 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 MAN1C1Q9NR34 630 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 TMEM260Q9NX78 707 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 RRN3Q9NYV6 651 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 NDUFA13Q9P0J0 144 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 MARCOQ9UEW3 520 aaPredicted RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 EBF1Q9UH73 591 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 SAP30BPQ9UHR5 308 aaKnown RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 ANAPC5Q9UJX4 755 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 TRPC5Q9UL62 973 aaPredicted RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 CCPG1Q9ULG6 757 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 DOCK2Q92608 1830 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 PVALEFA0A1B0GWK0 134 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 IPO5O00410 1097 aaKnown RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 AP1G1O43747 822 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 STRNO43815 780 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 PEX1O43933 1283 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 FKBP6O75344 327 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 CIB2O75838 187 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 CAMTA2O94983 1202 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 KITP10721 976 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 PLS3P13797 630 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 FDFT1P37268 417 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 ADCY8P40145 1251 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 CYP1B1Q16678 543 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 ODR4Q5SWX8 454 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 FAM182BQ5T319 152 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 PCNX4Q63HM2 1172 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 SNRNP48Q6IEG0 339 aaKnown RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 IQCF2Q8IXL9 164 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 STARD8Q92502 1023 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 RAD54LQ92698 747 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 SLC5A5Q92911 643 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 CALML4Q96GE6 196 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 GJD4Q96KN9 370 aaPredicted RBP11.19□□□□□ -0.62
RTN3-208ENST00000537981 GPR88Q9GZN0 384 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 ZHX3Q9H4I2 956 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 MAGEF1Q9HAY2 307 aa11.19□□□□□ -0.62
RTN3-208ENST00000537981 CAPN10Q9HC96 672 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms