RNA–Protein interactions for RNA: ENST00000537488.1

ATN1-203, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-203ENST00000537488 MRE11P49959 708 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 STARD6P59095 220 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 MYL6P60660 151 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 TSPY1Q01534 308 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 BECN1Q14457 450 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 TMEM150AQ86TG1 271 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 CCDC105Q8IYK2 499 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 TMEM86AQ8N2M4 240 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 TOP6BLQ8N6T0 577 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 DTWD2Q8NBA8 298 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 SPPL2BQ8TCT7 592 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 ATOH1Q92858 354 aaPredicted RBP17.59■□□□□ 0.41
ATN1-203ENST00000537488 ACBD6Q9BR61 282 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 SMG9Q9H0W8 520 aaKnown RBP17.59■□□□□ 0.41
ATN1-203ENST00000537488 CRTAC1Q9NQ79 661 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 DLGAP2Q9P1A6 1054 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 ATP6V1DQ9Y5K8 247 aa17.59■□□□□ 0.41
ATN1-203ENST00000537488 HEPACAM2A8MVW5 462 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 HMGA1P17096 107 aaKnown RBP17.58■□□□□ 0.4
ATN1-203ENST00000537488 GDI1P31150 447 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 SNRPFP62306 86 aaKnown RBP17.58■□□□□ 0.4
ATN1-203ENST00000537488 MYL7Q01449 175 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 MYO1EQ12965 1108 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 PSMD2Q13200 908 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 GPR158Q5T848 1215 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 PHLDB3Q6NSJ2 640 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 LEMD2Q8NC56 503 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 ERCC4Q92889 916 aaPredicted RBP17.58■□□□□ 0.4
ATN1-203ENST00000537488 MMS19Q96T76 1030 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 PRRX2Q99811 253 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 HSFX1Q9UBD0 423 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 MAGED2Q9UNF1 606 aaPredicted RBP17.58■□□□□ 0.4
ATN1-203ENST00000537488 ASB3Q9Y575 518 aa17.58■□□□□ 0.4
ATN1-203ENST00000537488 PATJQ8NI35 1801 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 PRAMEF12O95522 483 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 NR3C1P04150 777 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 PNOCQ13519 176 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 TDRD10Q5VZ19 366 aaKnown RBP17.57■□□□□ 0.4
ATN1-203ENST00000537488 TPRG1Q6ZUI0 275 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 ITIH5Q86UX2 942 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 ARID3BQ8IVW6 561 aaPredicted RBP17.57■□□□□ 0.4
ATN1-203ENST00000537488 SMYD4Q8IYR2 804 aaPredicted RBP17.57■□□□□ 0.4
ATN1-203ENST00000537488 PJA1Q8NG27 643 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 PARD3BQ8TEW8 1205 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 C2orf15Q8WU43 125 aaKnown RBP17.57■□□□□ 0.4
ATN1-203ENST00000537488 SYT15Q9BQS2 421 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 DDX23Q9BUQ8 820 aaKnown RBP17.57■□□□□ 0.4
ATN1-203ENST00000537488 TRMT61BQ9BVS5 477 aaKnown RBP17.57■□□□□ 0.4
ATN1-203ENST00000537488 XYLT2Q9H1B5 865 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 DPEP3Q9H4B8 488 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 BRD9Q9H8M2 597 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 CGNQ9P2M7 1197 aaKnown RBP17.57■□□□□ 0.4
ATN1-203ENST00000537488 SIT1Q9Y3P8 196 aa17.57■□□□□ 0.4
ATN1-203ENST00000537488 R3HCC1Q9Y3T6 440 aaKnown RBP17.57■□□□□ 0.4
ATN1-203ENST00000537488 DMDP11532 3685 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 KANSL1LA0AUZ9 987 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 RHOBTB3O94955 611 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 VNN1O95497 513 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 C4BPAP04003 597 aaKnown RBP17.56■□□□□ 0.4
ATN1-203ENST00000537488 WARSP23381 471 aaKnown RBP17.56■□□□□ 0.4
ATN1-203ENST00000537488 RAP1GAPP47736 663 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 LHX1P48742 406 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 CDH8P55286 799 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 UBXN2BQ14CS0 331 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 VEPH1Q14D04 833 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 WDR72Q3MJ13 1102 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 C1orf220Q5T0J3 134 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 FAM171BQ6P995 826 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 SCN4BQ8IWT1 228 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 TTC8Q8TAM2 541 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 MYLPFQ96A32 169 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 ZFYVE19Q96K21 471 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 SLC46A2Q9BY10 475 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 TRPV4Q9HBA0 871 aa17.56■□□□□ 0.4
ATN1-203ENST00000537488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.56■□□□□ 0.4
ATN1-203ENST00000537488 NXF1Q9UBU9 619 aaKnown RBP17.56■□□□□ 0.4
ATN1-203ENST00000537488 MYO15AQ9UKN7 3530 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 PDXKO00764 312 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 TADA3O75528 432 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 F11P03951 625 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 PSMC3P17980 439 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 TARSP26639 723 aaKnown RBP17.55■□□□□ 0.4
ATN1-203ENST00000537488 SMARCB1Q12824 385 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 TRPC3Q13507 836 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 ANGPT1Q15389 498 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 TAF12Q16514 161 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 NFE2Q16621 373 aaPredicted RBP17.55■□□□□ 0.4
ATN1-203ENST00000537488 CEP135Q66GS9 1140 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 DPH6Q7L8W6 267 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 SPATA2LQ8IUW3 424 aaPredicted RBP17.55■□□□□ 0.4
ATN1-203ENST00000537488 SLC9A9Q8IVB4 645 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 MFSD6LQ8IWD5 586 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 FMR1NBQ8N0W7 255 aaPredicted RBP17.55■□□□□ 0.4
ATN1-203ENST00000537488 SDCBP2Q9H190 292 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 SMYD3Q9H7B4 428 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 LTB4R2Q9NPC1 389 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 F5P12259 2224 aa17.55■□□□□ 0.4
ATN1-203ENST00000537488 MYH10P35580 1976 aa17.54■□□□□ 0.4
ATN1-203ENST00000537488 FAM170BA6NMN3 283 aa17.54■□□□□ 0.4
ATN1-203ENST00000537488 SLC38A8A6NNN8 435 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms