RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SMC1AQ14683 1233 aaKnown RBP25.8■■□□□ 1.72
HMGA2-208ENST00000537429 SFMBT2Q5VUG0 894 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 PLPP4Q5VZY2 271 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 PDE12Q6L8Q7 609 aaKnown RBP25.8■■□□□ 1.72
HMGA2-208ENST00000537429 LRRTM3Q86VH5 581 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 OR8K1Q8NGG5 319 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 PDLIM2Q96JY6 352 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 HEXIM2Q96MH2 286 aaKnown RBP25.8■■□□□ 1.72
HMGA2-208ENST00000537429 DNAJC7Q99615 494 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 GTF3C4Q9UKN8 822 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 KIAA1257Q9ULG3 409 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 CDY1Q9Y6F8 540 aa25.8■■□□□ 1.72
HMGA2-208ENST00000537429 MYBPHLA2RUH7 354 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 ADAM12O43184 909 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 LPXNO60711 386 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 FERP16591 822 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 RPL17P18621 184 aaKnown RBP25.79■■□□□ 1.72
HMGA2-208ENST00000537429 HNRNPH3P31942 346 aaKnown RBP25.79■■□□□ 1.72
HMGA2-208ENST00000537429 BPIFB4P59827 614 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 CREMQ03060 361 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 SLC47A2Q86VL8 602 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 GPIHBP1Q8IV16 184 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 C12orf29Q8N999 325 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 LPIN3Q9BQK8 851 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 ABHD10Q9NUJ1 306 aa25.79■■□□□ 1.72
HMGA2-208ENST00000537429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.78■■□□□ 1.72
HMGA2-208ENST00000537429 C2orf71A6NGG8 1288 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 CALCAP01258 141 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 OR4Q2P0C623 313 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 ARID5AQ03989 594 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 CCDC142Q17RM4 750 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 ZNF697Q5TEC3 545 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 MYCBPAPQ8TBZ2 947 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 TTYH1Q9H313 450 aaPredicted RBP25.78■■□□□ 1.72
HMGA2-208ENST00000537429 PCDHGC5Q9Y5F6 944 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 COL4A4P53420 1690 aaPredicted RBP25.78■■□□□ 1.72
HMGA2-208ENST00000537429 MYO9BQ13459 2157 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 HIDE1A8MVS5 230 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 TEX28O15482 410 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 CNPP09543 421 aaKnown RBP25.78■■□□□ 1.72
HMGA2-208ENST00000537429 CCDC172P0C7W6 258 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 VDRP11473 427 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 CYP11B1P15538 503 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 GNA15P30679 374 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 OR1D2P34982 312 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 ASIC2Q16515 512 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 DCP1BQ8IZD4 617 aaKnown RBP25.78■■□□□ 1.72
HMGA2-208ENST00000537429 TFAP2BQ92481 460 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 ZSWIM1Q9BR11 485 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 TMLHEQ9NVH6 421 aa25.78■■□□□ 1.72
HMGA2-208ENST00000537429 CD19P15391 556 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 PRKCIP41743 596 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 ARPP19P56211 112 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 ROR1Q01973 937 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 GPR17Q13304 367 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 MAPRE1Q15691 268 aaKnown RBP25.77■■□□□ 1.72
HMGA2-208ENST00000537429 MDH1BQ5I0G3 518 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 GLYCTKQ8IVS8 523 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 EPS8L1Q8TE68 723 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 ZNF606Q8WXB4 792 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 CYFIP2Q96F07 1278 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 PCED1BQ96HM7 432 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 PRDM12Q9H4Q4 367 aa25.77■■□□□ 1.72
HMGA2-208ENST00000537429 GOLGA6L6A8MZA4 724 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 CPB1P15086 417 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 BRD2P25440 801 aaKnown RBP25.76■■□□□ 1.71
HMGA2-208ENST00000537429 NDUFV1P49821 464 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 RAB33AQ14088 237 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 PTPROQ16827 1216 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 SLC39A12Q504Y0 691 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 SGO2Q562F6 1265 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 PPP1R26Q5T8A7 1209 aaPredicted RBP25.76■■□□□ 1.71
HMGA2-208ENST00000537429 ARHGAP17Q68EM7 881 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 WDR59Q6PJI9 974 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 DDX1Q92499 740 aaKnown RBP25.76■■□□□ 1.71
HMGA2-208ENST00000537429 FAM161BQ96MY7 647 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 KLHL5Q96PQ7 755 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 EMILIN2Q9BXX0 1053 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 FAM49BQ9NUQ9 324 aa25.76■■□□□ 1.71
HMGA2-208ENST00000537429 WDR27A2RRH5 827 aa25.75■■□□□ 1.71
HMGA2-208ENST00000537429 PDE6CP51160 858 aa25.75■■□□□ 1.71
HMGA2-208ENST00000537429 SMARCB1Q12824 385 aa25.75■■□□□ 1.71
HMGA2-208ENST00000537429 TSR1Q2NL82 804 aaKnown RBP25.75■■□□□ 1.71
HMGA2-208ENST00000537429 HABP4Q5JVS0 413 aaKnown RBP25.75■■□□□ 1.71
HMGA2-208ENST00000537429 HGSNATQ68CP4 663 aa25.75■■□□□ 1.71
HMGA2-208ENST00000537429 NOP9Q86U38 636 aaKnown RBP25.75■■□□□ 1.71
HMGA2-208ENST00000537429 NOCTQ9UK39 431 aaKnown RBP25.75■■□□□ 1.71
HMGA2-208ENST00000537429 ATG2AQ2TAZ0 1938 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 O00370 1275 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 THAP12O43422 761 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 CCDC130P13994 396 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 GSDMDP57764 484 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 GRIN2CQ14957 1233 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 CNGA2Q16280 664 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 NFE2Q16621 373 aaPredicted RBP25.74■■□□□ 1.71
HMGA2-208ENST00000537429 MEA1Q16626 185 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 RNF19BQ6ZMZ0 732 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 PAQR9Q6ZVX9 377 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 FUKQ8N0W3 1084 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 ZNF461Q8TAF7 563 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms