RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CAMKK2Q96RR4 588 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 BHMT2Q9H2M3 363 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 MRPL46Q9H2W6 279 aaKnown RBP6.67□□□□□ -1.34
CCDC7-208ENST00000537047 ZNF521Q96K83 1311 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 DCLK1O15075 740 aa6.66□□□□□ -1.34
CCDC7-208ENST00000537047 TUBA4AP68366 448 aa6.66□□□□□ -1.34
CCDC7-208ENST00000537047 TREML2Q5T2D2 321 aa6.66□□□□□ -1.34
CCDC7-208ENST00000537047 NAPRTQ6XQN6 538 aa6.66□□□□□ -1.34
CCDC7-208ENST00000537047 SLC29A4Q7RTT9 530 aa6.66□□□□□ -1.34
CCDC7-208ENST00000537047 TTYH3Q9C0H2 523 aa6.66□□□□□ -1.34
CCDC7-208ENST00000537047 SPRTNQ9H040 489 aaPredicted RBP6.66□□□□□ -1.34
CCDC7-208ENST00000537047 FNDC1Q4ZHG4 1894 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-208ENST00000537047 PPP6CO00743 305 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 SOAT2O75908 522 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 NXPH3O95157 252 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 IGKV2-30P06310 120 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 IL6RP08887 468 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-208ENST00000537047 ENGP17813 658 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 CYP4F2P78329 520 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 ZNF618Q5T7W0 954 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 SLC46A1Q96NT5 459 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 FCRL4Q96PJ5 515 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 NRIP3Q9NQ35 241 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-208ENST00000537047 SERTAD3Q9UJW9 196 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 SSX2IPQ9Y2D8 614 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 PCDHA1Q9Y5I3 950 aa6.65□□□□□ -1.34
CCDC7-208ENST00000537047 PRRT4C9JH25 899 aa6.64□□□□□ -1.35
CCDC7-208ENST00000537047 PDCP20941 246 aa6.64□□□□□ -1.35
CCDC7-208ENST00000537047 ALDH9A1P49189 494 aa6.64□□□□□ -1.35
CCDC7-208ENST00000537047 HK3P52790 923 aa6.64□□□□□ -1.35
CCDC7-208ENST00000537047 EEFSECP57772 596 aaKnown RBP6.64□□□□□ -1.35
CCDC7-208ENST00000537047 EXOSC9Q06265 439 aaKnown RBP6.64□□□□□ -1.35
CCDC7-208ENST00000537047 PCID2Q5JVF3 399 aa6.64□□□□□ -1.35
CCDC7-208ENST00000537047 MORN5Q5VZ52 161 aa6.64□□□□□ -1.35
CCDC7-208ENST00000537047 DTX2Q86UW9 622 aa6.64□□□□□ -1.35
CCDC7-208ENST00000537047 PCSK9Q8NBP7 692 aaKnown RBP6.64□□□□□ -1.35
CCDC7-208ENST00000537047 TBC1D5Q92609 795 aa6.64□□□□□ -1.35
CCDC7-208ENST00000537047 POLHQ9Y253 713 aa6.64□□□□□ -1.35
CCDC7-208ENST00000537047 QSOX1O00391 747 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 FTLP02792 175 aaPredicted RBP6.63□□□□□ -1.35
CCDC7-208ENST00000537047 FESP07332 822 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 FTH1P19P0C7X4 201 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 PTGER1P34995 402 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 MAP2K6P52564 334 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 AARS2Q5JTZ9 985 aaKnown RBP6.63□□□□□ -1.35
CCDC7-208ENST00000537047 ANKRD16Q6P6B7 361 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 CHSY1Q86X52 802 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 MIER2Q8N344 545 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 CPA6Q8N4T0 437 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 PRPF38AQ8NAV1 312 aaKnown RBP6.63□□□□□ -1.35
CCDC7-208ENST00000537047 RGMAQ96B86 450 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 SMAD5Q99717 465 aaKnown RBP6.63□□□□□ -1.35
CCDC7-208ENST00000537047 SEMA4CQ9C0C4 833 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 SIK2Q9H0K1 926 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 WDCPQ9H6R7 721 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 DUSP22Q9NRW4 184 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 ZDHHC8Q9ULC8 765 aa6.63□□□□□ -1.35
CCDC7-208ENST00000537047 MOSPD3O75425 235 aa6.62□□□□□ -1.35
CCDC7-208ENST00000537047 BMP15O95972 392 aa6.62□□□□□ -1.35
CCDC7-208ENST00000537047 TOP3BO95985 862 aaKnown RBP6.62□□□□□ -1.35
CCDC7-208ENST00000537047 GNAI2P04899 355 aa6.62□□□□□ -1.35
CCDC7-208ENST00000537047 PIM1P11309 404 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-208ENST00000537047 HDCP19113 662 aa6.62□□□□□ -1.35
CCDC7-208ENST00000537047 CERS1P27544 350 aa6.62□□□□□ -1.35
CCDC7-208ENST00000537047 AMPD3Q01432 767 aa6.62□□□□□ -1.35
CCDC7-208ENST00000537047 FAM160B1Q5W0V3 765 aa6.62□□□□□ -1.35
CCDC7-208ENST00000537047 CELF5Q8N6W0 485 aaKnown RBP6.62□□□□□ -1.35
CCDC7-208ENST00000537047 PDGFCQ9NRA1 345 aa6.62□□□□□ -1.35
CCDC7-208ENST00000537047 HESX1Q9UBX0 185 aa6.62□□□□□ -1.35
CCDC7-208ENST00000537047 FEZ2Q9UHY8 353 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-208ENST00000537047 SMIM35A0A1B0GVV1 85 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 KCNU1A8MYU2 1149 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 IKBKBO14920 756 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 DNAJB5O75953 348 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 TYRP14679 529 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 ARHGAP25P42331 645 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 LILRA4P59901 499 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 ARHGAP40Q5TG30 622 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 ICE2Q659A1 982 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 SLC9A4Q6AI14 798 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 CATIPQ7Z7H3 387 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 PRR18Q8N4B5 295 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 PNLDC1Q8NA58 520 aaKnown RBP6.61□□□□□ -1.35
CCDC7-208ENST00000537047 CYP2W1Q8TAV3 490 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 ATG4AQ8WYN0 398 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 SLC13A1Q9BZW2 595 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 LMBRD1Q9NUN5 540 aa6.61□□□□□ -1.35
CCDC7-208ENST00000537047 SLC16A3O15427 465 aaKnown RBP6.6□□□□□ -1.35
CCDC7-208ENST00000537047 TUBB4AP04350 444 aa6.6□□□□□ -1.35
CCDC7-208ENST00000537047 PDE1AP54750 535 aa6.6□□□□□ -1.35
CCDC7-208ENST00000537047 TEDDM1Q5T9Z0 273 aa6.6□□□□□ -1.35
CCDC7-208ENST00000537047 LRRC71Q8N4P6 559 aa6.6□□□□□ -1.35
CCDC7-208ENST00000537047 DENND1AQ8TEH3 1009 aa6.6□□□□□ -1.35
CCDC7-208ENST00000537047 GLG1Q92896 1179 aa6.6□□□□□ -1.35
CCDC7-208ENST00000537047 R3HDM4Q96D70 268 aa6.6□□□□□ -1.35
CCDC7-208ENST00000537047 C5orf34Q96MH7 638 aa6.6□□□□□ -1.35
CCDC7-208ENST00000537047 ELOVL5Q9NYP7 299 aa6.6□□□□□ -1.35
CCDC7-208ENST00000537047 WASHC2CQ9Y4E1 1318 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms