RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ZDHHC9Q9Y397 364 aa15.34■□□□□ 0.05
RTN3P1-201ENST00000536295 PIAS3Q9Y6X2 628 aa15.34■□□□□ 0.05
RTN3P1-201ENST00000536295 R4GN57 208 aa15.34■□□□□ 0.05
RTN3P1-201ENST00000536295 USP34Q70CQ2 3546 aa15.34■□□□□ 0.05
RTN3P1-201ENST00000536295 SHISA7A6NL88 538 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 ACTN4O43707 911 aaKnown RBP15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 SP9P0CG40 484 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 PFKFB1P16118 471 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 CYP2F1P24903 491 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 LHX1P48742 406 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 KRT85P78386 507 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 CYP24A1Q07973 514 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 DDR2Q16832 855 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 TRAPPC11Q7Z392 1133 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 PAGE5Q96GU1 130 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 MMS19Q96T76 1030 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 NELL2Q99435 816 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 CGRRF1Q99675 332 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 OSBPL6Q9BZF3 934 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 SMG9Q9H0W8 520 aaKnown RBP15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 IL21Q9HBE4 155 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 EXOC1Q9NV70 894 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 MYO15AQ9UKN7 3530 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 MIA3Q5JRA6 1907 aa15.33■□□□□ 0.04
RTN3P1-201ENST00000536295 MAN2B1O00754 1011 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 NCAM2O15394 837 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 LAMTOR5O43504 91 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 KLRC4O43908 158 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 ATP2C2O75185 946 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 PRAMEF12O95522 483 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 PCSK1P29120 753 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 PSMC1P62191 440 aaKnown RBP15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 SNRPFP62306 86 aaKnown RBP15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 PSMD6Q15008 389 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 KNOP1Q1ED39 458 aaKnown RBP15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 BMT2Q1RMZ1 405 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 KMT5BQ4FZB7 885 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 SPATA2LQ8IUW3 424 aaPredicted RBP15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 TTC8Q8TAM2 541 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 CSGALNACT1Q8TDX6 532 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 FAM3CQ92520 227 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 ZFYVE19Q96K21 471 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 LRRC3BQ96PB8 259 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 PKMYT1Q99640 499 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 TASP1Q9H6P5 420 aa15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 ZFHX2Q9C0A1 2572 aaPredicted RBP15.32■□□□□ 0.04
RTN3P1-201ENST00000536295 TICRRQ7Z2Z1 1910 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 MYBPHLA2RUH7 354 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 SLC38A8A6NNN8 435 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 GABRDO14764 452 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 CHADO15335 359 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 EXOC3O60645 756 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 CST3P01034 146 aaPredicted RBP15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 PDGFRBP09619 1106 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 CSH1P0DML2 217 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 CSH2P0DML3 217 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 HMGA1P17096 107 aaKnown RBP15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 CMA1P23946 247 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 CCNE1P24864 410 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 LMO2P25791 158 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 SOX9P48436 509 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 KPNA1P52294 538 aaPredicted RBP15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 NLRP12P59046 1061 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 RPL10AP62906 217 aaKnown RBP15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 FCHO2Q0JRZ9 810 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 STK4Q13043 487 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 SCN4BQ8IWT1 228 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 MAML2Q8IZL2 1156 aaPredicted RBP15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 SPATA18Q8TC71 538 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 KBTBD7Q8WVZ9 684 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 SYT15Q9BQS2 421 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 SLC46A2Q9BY10 475 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 TRPV5Q9NQA5 729 aa15.31■□□□□ 0.04
RTN3P1-201ENST00000536295 DMDP11532 3685 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 ARNTLO00327 626 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 CLSTN1O94985 981 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 F11P03951 625 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 COL4A2P08572 1712 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 MAGEA9P43362 315 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 CASP4P49662 377 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 CSTF1Q05048 431 aaKnown RBP15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 FZD5Q13467 585 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 TRPC3Q13507 836 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 TXNDC8Q6A555 127 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 DPH6Q7L8W6 267 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 TMEM150AQ86TG1 271 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 MAB21L3Q8N8X9 362 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 KIAA0895Q8NCT3 520 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 BPIFB1Q8TDL5 484 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 ZNF516Q92618 1163 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 CLDN23Q96B33 292 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 MRPL45Q9BRJ2 306 aaKnown RBP15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 ABCB6Q9NP58 842 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 CGNQ9P2M7 1197 aaKnown RBP15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 CDH9Q9ULB4 789 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 HPSEQ9Y251 543 aa15.3■□□□□ 0.04
RTN3P1-201ENST00000536295 PHACTR2O75167 634 aa15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 WARSP23381 471 aaKnown RBP15.29■□□□□ 0.04
RTN3P1-201ENST00000536295 AVPR1AP37288 418 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms