RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 NECTIN4Q96NY8 510 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 TWNKQ96RR1 684 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 COL25A1Q9BXS0 654 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 IMPG2Q9BZV3 1241 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 NIF3L1Q9GZT8 377 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 SNX25Q9H3E2 840 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 PIDD1Q9HB75 910 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 WDR6Q9NNW5 1121 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 ABI2Q9NYB9 513 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 HSFX1Q9UBD0 423 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 PRKAG3Q9UGI9 489 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 FAM50BQ9Y247 325 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 NFE2L3Q9Y4A8 694 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 VCANP13611 3396 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 CLUHO75153 1309 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 MYH10P35580 1976 aa12.09□□□□□ -0.47
TNFRSF1A-208ENST00000536194 A8MXQ7 604 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 LRG1P02750 347 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 HAPLN1P10915 354 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 P4HA1P13674 534 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PTPN1P18031 435 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CYP2F1P24903 491 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GPR15P49685 360 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NDST1P52848 882 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 INCA1Q0VD86 236 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SMARCB1Q12824 385 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TPD52L1Q16890 204 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MIIPQ5JXC2 388 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CDKAL1Q5VV42 579 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CREBRFQ8IUR6 639 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 STKLD1Q8NE28 680 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SPPL2BQ8TCT7 592 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 C2orf15Q8WU43 125 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MYLPFQ96A32 169 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PCED1BQ96HM7 432 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 RPGRIP1Q96KN7 1286 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 UHRF1Q96T88 793 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SEPT5Q99719 369 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 LRRC3Q9BY71 257 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 HSD3B7Q9H2F3 369 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PCDHB5Q9Y5E4 795 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PATJQ8NI35 1801 aa12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ZNF638Q14966 1978 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SYCE3A1L190 88 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 C2CD4DB7Z1M9 353 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 LOC730098B7Z3J9 87 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 P4HA2O15460 535 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 XYLBO75191 536 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CILPO75339 1184 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 RHOP08100 348 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CD58P19256 250 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PTMSP20962 102 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CCR2P41597 374 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CACNA2D1P54289 1103 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 LRMPQ12912 555 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NCAPHQ15003 741 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NFE2Q16621 373 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SLC5A9Q2M3M2 681 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MGAT5BQ3V5L5 792 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CFAP221Q4G0U5 840 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MDH1BQ5I0G3 518 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 WDR44Q5JSH3 913 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SDHAF4Q5VUM1 108 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 POTEHQ6S545 545 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ACOT1Q86TX2 421 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TMC8Q8IU68 726 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 HS6ST3Q8IZP7 471 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 UBR7Q8N806 425 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 B3GALNT2Q8NCR0 500 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CCDC150Q8NCX0 1101 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ITFG1Q8TB96 612 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MYCBPAPQ8TBZ2 947 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GPR152Q8TDT2 470 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FAXDC2Q96IV6 333 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 B3GNT5Q9BYG0 378 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CYP3A43Q9HB55 503 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ABCB6Q9NP58 842 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TMEM30AQ9NV96 361 aa12.07□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MYO10Q9HD67 2058 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ANAPC1Q9H1A4 1944 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 KCNJ18B7U540 433 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CLDN5O00501 218 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MTIF2P46199 727 aaKnown RBP12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CUL2Q13617 745 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 KCNJ12Q14500 433 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NFKBIBQ15653 356 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MAN2A1Q16706 1144 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PABPC1LQ4VXU2 614 aaKnown RBP12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TCP11X2Q5H9J9 407 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PRSS36Q5K4E3 855 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PAQR9Q6ZVX9 377 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 UNC93AQ86WB7 457 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SPATA2LQ8IUW3 424 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ARHGEF19Q8IW93 802 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FAM114A1Q8IWE2 563 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CRYBG2Q8N1P7 616 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 KHSRPQ92945 711 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 KAT5Q92993 513 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms