RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 ANKRD36BP1Q96IX9 119 aa9.51□□□□□ -0.89
CHD4-204ENST00000535810 SEPT5Q99719 369 aaPredicted RBP9.51□□□□□ -0.89
CHD4-204ENST00000535810 LRRC3Q9BY71 257 aa9.51□□□□□ -0.89
CHD4-204ENST00000535810 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
CHD4-204ENST00000535810 GOLPH3LQ9H4A5 285 aa9.51□□□□□ -0.89
CHD4-204ENST00000535810 GDPD2Q9HCC8 539 aa9.51□□□□□ -0.89
CHD4-204ENST00000535810 ARHGEF3Q9NR81 526 aa9.51□□□□□ -0.89
CHD4-204ENST00000535810 EXOC1Q9NV70 894 aa9.51□□□□□ -0.89
CHD4-204ENST00000535810 GDAP2Q9NXN4 497 aa9.51□□□□□ -0.89
CHD4-204ENST00000535810 CGNQ9P2M7 1197 aaKnown RBP9.51□□□□□ -0.89
CHD4-204ENST00000535810 L1RE1Q9UN81 338 aa9.51□□□□□ -0.89
CHD4-204ENST00000535810 SNX9Q9Y5X1 595 aa9.51□□□□□ -0.89
CHD4-204ENST00000535810 F5P12259 2224 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 HUS1O60921 280 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 ECI2O75521 394 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 TNNC2P02585 160 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 DLATP10515 647 aaKnown RBP9.5□□□□□ -0.89
CHD4-204ENST00000535810 MYL4P12829 197 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 GJA1P17302 382 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 ATF6P18850 670 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 AOC1P19801 751 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 ALDH1A3P47895 512 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 EPHB3P54753 998 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 GPC5P78333 572 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 TSPY1Q01534 308 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 SMARCB1Q12824 385 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 MYO1EQ12965 1108 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 PSMD6Q15008 389 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 TEAD2Q15562 447 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 FAM78AQ5JUQ0 283 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 KRBA2Q6ZNG9 492 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 ADGRF2Q8IZF7 708 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 TMEM86AQ8N2M4 240 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 TOP6BLQ8N6T0 577 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 RDH13Q8NBN7 331 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 GOLGA5Q8TBA6 731 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 SHKBP1Q8TBC3 707 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 C2orf15Q8WU43 125 aaKnown RBP9.5□□□□□ -0.89
CHD4-204ENST00000535810 PSMG2Q969U7 264 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 HPDLQ96IR7 371 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 ZSWIM3Q96MP5 696 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 ASB16Q96NS5 453 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 CGRRF1Q99675 332 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 LPIN3Q9BQK8 851 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 ABI2Q9NYB9 513 aaPredicted RBP9.5□□□□□ -0.89
CHD4-204ENST00000535810 CA14Q9ULX7 337 aa9.5□□□□□ -0.89
CHD4-204ENST00000535810 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 GABRDO14764 452 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 HCRTO43612 131 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 PI15O43692 258 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 EXOC3O60645 756 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 KRT37O76014 449 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 RPN1P04843 607 aaKnown RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 TNNI1P19237 187 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 ACAT1P24752 427 aaKnown RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 CLCN1P35523 988 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 TUFMP49411 452 aaKnown RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 MYL7Q01449 175 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 DPYDQ12882 1025 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 PSMD2Q13200 908 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 NFE2Q16621 373 aaPredicted RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 CCDC142Q17RM4 750 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 SOWAHAQ2M3V2 549 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 MGAT5BQ3V5L5 792 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 INTS6LQ5JSJ4 861 aaKnown RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 TANGO2Q6ICL3 276 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 NUDT18Q6ZVK8 323 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 GAREM2Q75VX8 874 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 TRAPPC11Q7Z392 1133 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 LIMS2Q7Z4I7 341 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 DNAJB7Q7Z6W7 309 aaPredicted RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 ITIH5Q86UX2 942 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 OSTM1Q86WC4 334 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 DCP1BQ8IZD4 617 aaKnown RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 SPATA18Q8TC71 538 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 SPPL2BQ8TCT7 592 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 TMEM174Q8WUU8 243 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 SMARCD2Q92925 531 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 ELSPBP1Q96BH3 223 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 FNBP1Q96RU3 617 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 PKMYT1Q99640 499 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 ACBD6Q9BR61 282 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 PLA2G2FQ9BZM2 168 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 KCTD10Q9H3F6 313 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 TBC1D17Q9HA65 648 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 ZFP14Q9HCL3 533 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 ZNF334Q9HCZ1 680 aaPredicted RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 TMLHEQ9NVH6 421 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 DDX43Q9NXZ2 648 aaKnown RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 R3HCC1Q9Y3T6 440 aaKnown RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 ASB3Q9Y575 518 aa9.49□□□□□ -0.89
CHD4-204ENST00000535810 KMT2BQ9UMN6 2715 aaPredicted RBP9.49□□□□□ -0.89
CHD4-204ENST00000535810 ZNF292O60281 2723 aa9.48□□□□□ -0.89
CHD4-204ENST00000535810 SMAPO00193 183 aa9.48□□□□□ -0.89
CHD4-204ENST00000535810 RHOBTB3O94955 611 aa9.48□□□□□ -0.89
CHD4-204ENST00000535810 ZNF202O95125 648 aa9.48□□□□□ -0.89
CHD4-204ENST00000535810 NR3C1P04150 777 aa9.48□□□□□ -0.89
CHD4-204ENST00000535810 HAPLN1P10915 354 aaPredicted RBP9.48□□□□□ -0.89
CHD4-204ENST00000535810 LHX1P48742 406 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms