RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 SOWAHAQ2M3V2 549 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 KMT5BQ4FZB7 885 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 GPR158Q5T848 1215 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 TMC8Q8IU68 726 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 SLC9A9Q8IVB4 645 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 ARID3BQ8IVW6 561 aaPredicted RBP12.73□□□□□ -0.37
KNTC1-208ENST00000535410 OR5B17Q8NGF7 314 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 CXorf38Q8TB03 319 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 CSGALNACT1Q8TDX6 532 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 SYAP1Q96A49 352 aaPredicted RBP12.73□□□□□ -0.37
KNTC1-208ENST00000535410 ZSWIM3Q96MP5 696 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 DDX23Q9BUQ8 820 aaKnown RBP12.73□□□□□ -0.37
KNTC1-208ENST00000535410 LRRC3Q9BY71 257 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 GTPBP4Q9BZE4 634 aaKnown RBP12.73□□□□□ -0.37
KNTC1-208ENST00000535410 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 SNX25Q9H3E2 840 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 HPSEQ9Y251 543 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 FRMD4BQ9Y2L6 1034 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 HEPACAM2A8MVW5 462 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 CHADO15335 359 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 STAU1O95793 577 aaKnown RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 RPN1P04843 607 aaKnown RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 P4HA1P13674 534 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 GJA1P17302 382 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 TRIM21P19474 475 aaKnown RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 FCARP24071 287 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 CASP1P29466 404 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 GNL1P36915 607 aaPredicted RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 AVPR1AP37288 418 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 MAGEA11P43364 429 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 NDUFA8P51970 172 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 WNT7BP56706 349 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 STK4Q13043 487 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 ANGPT1Q15389 498 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 ARHGAP29Q52LW3 1261 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 LMBRD2Q68DH5 695 aaPredicted RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 ZC3H14Q6PJT7 736 aaKnown RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 VSTM1Q6UX27 236 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 TPRG1Q6ZUI0 275 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 GAREM2Q75VX8 874 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 C1orf210Q8IVY1 113 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 GRAMD1CQ8IYS0 662 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 FSIP1Q8NA03 581 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 GIPC2Q8TF65 315 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 MRPS31Q92665 395 aaKnown RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 IER2Q9BTL4 223 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 PI4K2AQ9BTU6 479 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 PLA2G2FQ9BZM2 168 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 C8orf33Q9H7E9 229 aaPredicted RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 ZNF334Q9HCZ1 680 aaPredicted RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 MAGEC2Q9UBF1 373 aaPredicted RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 HOOK1Q9UJC3 728 aaKnown RBP12.72□□□□□ -0.37
KNTC1-208ENST00000535410 GTF3C4Q9UKN8 822 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 ZDHHC9Q9Y397 364 aa12.72□□□□□ -0.37
KNTC1-208ENST00000535410 KLRC4O43908 158 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 TACC1O75410 805 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 SOAT2O75908 522 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 CLSTN1O94985 981 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 DCNP07585 359 aaKnown RBP12.71□□□□□ -0.37
KNTC1-208ENST00000535410 WARSP23381 471 aaKnown RBP12.71□□□□□ -0.37
KNTC1-208ENST00000535410 ANXA13P27216 316 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 NBL1P41271 181 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 VIPR2P41587 438 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 RPS9P46781 194 aaKnown RBP12.71□□□□□ -0.37
KNTC1-208ENST00000535410 PDE6CP51160 858 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 BIRC3Q13489 604 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 GRM2Q14416 872 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 PPP2R5DQ14738 602 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 WDR72Q3MJ13 1102 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 FAM171BQ6P995 826 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 VITQ6UXI7 678 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 LIMS2Q7Z4I7 341 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 TTC9BQ8N6N2 239 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 CELF5Q8N6W0 485 aaKnown RBP12.71□□□□□ -0.37
KNTC1-208ENST00000535410 LPIN3Q9BQK8 851 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 FOXQ1Q9C009 403 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 DNAI2Q9GZS0 605 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 LTB4R2Q9NPC1 389 aa12.71□□□□□ -0.37
KNTC1-208ENST00000535410 DOCK6Q96HP0 2047 aa12.71□□□□□ -0.38
KNTC1-208ENST00000535410 IKBKBO14920 756 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 MAPK13O15264 365 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 LAMTOR5O43504 91 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 GFRA3O60609 400 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 RHOBTB3O94955 611 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 ZNF202O95125 648 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 NR3C1P04150 777 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 ATF6P18850 670 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
KNTC1-208ENST00000535410 CYP2F1P24903 491 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 KPNA1P52294 538 aaPredicted RBP12.7□□□□□ -0.38
KNTC1-208ENST00000535410 CLDN10P78369 228 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 AMPD2Q01433 879 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 FCHO2Q0JRZ9 810 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 KCNB1Q14721 858 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 CC2D1AQ6P1N0 951 aaPredicted RBP12.7□□□□□ -0.38
KNTC1-208ENST00000535410 KRBA2Q6ZNG9 492 aa12.7□□□□□ -0.38
KNTC1-208ENST00000535410 OR6B3Q8NGW1 331 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms