RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 CCNE1P24864 410 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 PCSK1P29120 753 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 HOXD13P35453 343 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 KPNA1P52294 538 aaPredicted RBP17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 FZD5Q13467 585 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 ARHGAP29Q52LW3 1261 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 INTS6LQ5JSJ4 861 aaKnown RBP17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 EPM2AIP1Q7L775 607 aaPredicted RBP17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 ADGRF2Q8IZF7 708 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 ATRIPQ8WXE1 791 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 HPDLQ96IR7 371 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 C8orf33Q9H7E9 229 aaPredicted RBP17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 ABCB6Q9NP58 842 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 PCDHA7Q9UN72 937 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 UBE4BO95155 1302 aa17.38■□□□□ 0.37
CLSTN3-204ENST00000535313 CSH1P0DML2 217 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 CSH2P0DML3 217 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 SNRPFP62306 86 aaKnown RBP17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 RPL10AP62906 217 aaKnown RBP17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 MTAPQ13126 283 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 SNRNP35Q16560 246 aaKnown RBP17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 SCARA3Q6AZY7 606 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 HS2ST1Q7LGA3 356 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 WDR49Q8IV35 697 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 ZNF687Q8N1G0 1237 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 RDH13Q8NBN7 331 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 SPRYD3Q8NCJ5 442 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 OR5B17Q8NGF7 314 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 BPIFB1Q8TDL5 484 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 HINFPQ9BQA5 517 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 IER2Q9BTL4 223 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 BLZF1Q9H2G9 400 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 CHRDQ9H2X0 955 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 LMAN1LQ9HAT1 526 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 AGPAT3Q9NRZ7 376 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 THG1LQ9NWX6 298 aaKnown RBP17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 GTF3C4Q9UKN8 822 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 PCDHGA2Q9Y5H1 932 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 ZNF292O60281 2723 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 TICRRQ7Z2Z1 1910 aa17.37■□□□□ 0.37
CLSTN3-204ENST00000535313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 PVALEFA0A1B0GWK0 134 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 SLC38A8A6NNN8 435 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 TGFB1I1O43294 461 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 PRAMEF12O95522 483 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 DLATP10515 647 aaKnown RBP17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 CYP2F1P24903 491 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 DDX6P26196 483 aaKnown RBP eCLIP17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 AVPR1AP37288 418 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 AFMP43652 599 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 NLRP12P59046 1061 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 PPP2R5DQ14738 602 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 SOWAHAQ2M3V2 549 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 RESP18Q5W5W9 173 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 DPH6Q7L8W6 267 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 OSTM1Q86WC4 334 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 SPATA2LQ8IUW3 424 aaPredicted RBP17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 NELFCDQ8IXH7 590 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 CELF5Q8N6W0 485 aaKnown RBP17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 SCFD1Q8WVM8 642 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 ZFYVE19Q96K21 471 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 LRRC3BQ96PB8 259 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 FNBP1Q96RU3 617 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 SLC46A2Q9BY10 475 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 PRMT8Q9NR22 394 aaPredicted RBP17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 ZSCAN32Q9NX65 697 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 MAGED2Q9UNF1 606 aaPredicted RBP17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 PTPRJQ12913 1337 aa17.36■□□□□ 0.37
CLSTN3-204ENST00000535313 PATJQ8NI35 1801 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 GABRDO14764 452 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 CLIC2O15247 247 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 F11P03951 625 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 HMGA1P17096 107 aaKnown RBP17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 TNNI1P19237 187 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 CASP1P29466 404 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 GPR15P49685 360 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 CYP2J2P51589 502 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 DNM1Q05193 864 aaKnown RBP17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 EHHADHQ08426 723 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 PKP1Q13835 747 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 LRRC32Q14392 662 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 DDR2Q16832 855 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 SDHAF4Q5VUM1 108 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 RALGPS2Q86X27 583 aaPredicted RBP17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 CMTM8Q8IZV2 173 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 MAB21L3Q8N8X9 362 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 XXYLT1Q8NBI6 393 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 MRPS31Q92665 395 aaKnown RBP17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 CCDC127Q96BQ5 260 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 FUBP3Q96I24 572 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 PKMYT1Q99640 499 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 FAM126AQ9BYI3 521 aaPredicted RBP17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 SMG9Q9H0W8 520 aaKnown RBP17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 SLC39A2Q9NP94 309 aa17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 CGNQ9P2M7 1197 aaKnown RBP17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 UXTQ9UBK9 157 aaPredicted RBP17.35■□□□□ 0.37
CLSTN3-204ENST00000535313 SOBPA7XYQ1 873 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 SPECC1L-ADORA2AF8WAN1 911 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms