RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 CFAP45Q9UL16 551 aa20.23■□□□□ 0.83
NDUFS3-213ENST00000534716 PCDHA7Q9UN72 937 aa20.23■□□□□ 0.83
NDUFS3-213ENST00000534716 SNX9Q9Y5X1 595 aa20.23■□□□□ 0.83
NDUFS3-213ENST00000534716 MIA3Q5JRA6 1907 aa20.23■□□□□ 0.83
NDUFS3-213ENST00000534716 PTPRJQ12913 1337 aa20.23■□□□□ 0.83
NDUFS3-213ENST00000534716 TNNC2P02585 160 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 KRT19P08727 400 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 DDX6P26196 483 aaKnown RBP eCLIP20.22■□□□□ 0.834e-6■■□□□ 13.7
NDUFS3-213ENST00000534716 PLCB2Q00722 1185 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 CSTF1Q05048 431 aaKnown RBP20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 TAF12Q16514 161 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 BMT2Q1RMZ1 405 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 CFAP221Q4G0U5 840 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 FOXD4L5Q5VV16 416 aaPredicted RBP20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 OR5B17Q8NGF7 314 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 CSGALNACT1Q8TDX6 532 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 SCFD1Q8WVM8 642 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 FOXD4L4Q8WXT5 416 aaPredicted RBP20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 FAM84AQ96KN4 292 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 SLC46A2Q9BY10 475 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 FAM13BQ9NYF5 915 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 CGNQ9P2M7 1197 aaKnown RBP20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 NDRG2Q9UN36 371 aaKnown RBP20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 PATJQ8NI35 1801 aa20.22■□□□□ 0.83
NDUFS3-213ENST00000534716 FAM186AA6NE01 2351 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 PVALEFA0A1B0GWK0 134 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 DPYSL4O14531 572 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 PRAMEF12O95522 483 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 HSP90AA1P07900 732 aaKnown RBP20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 CSH1P0DML2 217 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 CSH2P0DML3 217 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 CHRNB1P11230 501 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 PCSK1P29120 753 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 ME1P48163 572 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 NLRP12P59046 1061 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 RPL10AP62906 217 aaKnown RBP20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 CYP4F8P98187 520 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 MTAPQ13126 283 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 FAM171BQ6P995 826 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 OSTM1Q86WC4 334 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 ADGRF2Q8IZF7 708 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 CELF5Q8N6W0 485 aaKnown RBP20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 SUMF1Q8NBK3 374 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 NOC3LQ8WTT2 800 aaKnown RBP20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 TRMT2BQ96GJ1 504 aaKnown RBP20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 FUBP3Q96I24 572 aaKnown RBP eCLIP20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 HPDLQ96IR7 371 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 PI4K2AQ9BTU6 479 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 FAM126AQ9BYI3 521 aaPredicted RBP20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 ZSCAN32Q9NX65 697 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 RCOR1Q9UKL0 485 aa20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 PTPRZ1P23471 2315 aaPredicted RBP20.21■□□□□ 0.83
NDUFS3-213ENST00000534716 MYBPHLA2RUH7 354 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 KINO60870 393 aaKnown RBP20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 PRPF40AO75400 957 aaKnown RBP20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 NOL4O94818 638 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 CCNE1P24864 410 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 CDR1P51861 262 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 PKP1Q13835 747 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 SNRNP35Q16560 246 aaKnown RBP20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 LMBRD2Q68DH5 695 aaPredicted RBP20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 RALGPS2Q86X27 583 aaPredicted RBP20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 C12orf56Q8IXR9 622 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 CMTM8Q8IZV2 173 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 BPIFB1Q8TDL5 484 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 MYRFLQ96LU7 910 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 LMAN1LQ9HAT1 526 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 GTF3C4Q9UKN8 822 aa20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
NDUFS3-213ENST00000534716 CACNA1IQ9P0X4 2223 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 TULP1O00294 542 aaPredicted RBP20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 LILRB5O75023 590 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 FAM163BP0C2L3 166 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 TDGF1P13385 188 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 ACAT1P24752 427 aaKnown RBP20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 CYP2F1P24903 491 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 PSMD6Q15008 389 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 TRAPPC11Q7Z392 1133 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 XXYLT1Q8NBI6 393 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 KBTBD7Q8WVZ9 684 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 THG1LQ9NWX6 298 aaKnown RBP20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 UXTQ9UBK9 157 aaPredicted RBP20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 FANCMQ8IYD8 2048 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 DCHS1Q96JQ0 3298 aa20.19■□□□□ 0.82
NDUFS3-213ENST00000534716 NUP210Q8TEM1 1887 aaPredicted RBP20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 SPECC1L-ADORA2AF8WAN1 911 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 SLFN14P0C7P3 912 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 MAGEA11P43364 429 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 GPR15P49685 360 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 KPNA1P52294 538 aaPredicted RBP20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 DNM1Q05193 864 aaKnown RBP20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 CYP24A1Q07973 514 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 DDR2Q16832 855 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 FOXD4L6Q3SYB3 417 aaPredicted RBP20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 FOXD4L3Q6VB84 417 aaPredicted RBP20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 HS2ST1Q7LGA3 356 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 MON1AQ86VX9 555 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 GPIHBP1Q8IV16 184 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 TMEM174Q8WUU8 243 aa20.18■□□□□ 0.82
NDUFS3-213ENST00000534716 ATRIPQ8WXE1 791 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms