RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 CLNKQ7Z7G1 428 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 GPR149Q86SP6 731 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 LNX2Q8N448 690 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 TMIEQ8NEW7 156 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 DDX17Q92841 729 aaKnown RBP4.43□□□□□ -1.7
USP48-215ENST00000534705 MTFMTQ96DP5 389 aaKnown RBP4.43□□□□□ -1.7
USP48-215ENST00000534705 CDK5RAP3Q96JB5 506 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 TLR10Q9BXR5 811 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 SIK2Q9H0K1 926 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 LMBRD1Q9NUN5 540 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 TBCCD1Q9NVR7 557 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 CTTNBP2NLQ9P2B4 639 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 CDYLQ9Y232 598 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 STXBP5LQ9Y2K9 1186 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 SCAPERQ9BY12 1400 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 ARHGEF5Q12774 1597 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 NCOA2Q15596 1464 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 ZNF518AQ6AHZ1 1483 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 LRRC9Q6ZRR7 1453 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 MAGI2Q86UL8 1455 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 CLTCQ00610 1675 aaKnown RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 H3BML4 177 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 RBMXL2O75526 392 aaKnown RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 ONECUT2O95948 504 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 S100BP04271 92 aaPredicted RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 GJB1P08034 283 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 ITGAMP11215 1152 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 HOXB6P17509 224 aaKnown RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 ABCG1P45844 678 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 NFE2Q16621 373 aaPredicted RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 GEN1Q17RS7 908 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 IFIT1BQ5T764 474 aaKnown RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 TMPRSS9Q7Z410 1059 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 CFAP52Q8N1V2 620 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 ZNF366Q8N895 744 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 Q8N9P0 234 aaPredicted RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 PDPRQ8NCN5 879 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 DIS3LQ8TF46 1054 aaKnown RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 CNPPD1Q9BV87 410 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 C1QTNF7Q9BXJ2 289 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 MRPL46Q9H2W6 279 aaKnown RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 UNKLQ9H9P5 680 aaKnown RBP4.42□□□□□ -1.7
USP48-215ENST00000534705 ZIM2Q9NZV7 527 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 ABCF2Q9UG63 623 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 SLC45A2Q9UMX9 530 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 MAST1Q9Y2H9 1570 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 TRAPPC8Q9Y2L5 1435 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 PCDHA3Q9Y5H8 950 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP48-215ENST00000534705 MLH3Q9UHC1 1453 aa4.42□□□□□ -1.7
USP48-215ENST00000534705 PREX1Q8TCU6 1659 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 ATP7AQ04656 1500 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 CEP152O94986 1710 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 TRGV11A0A075B6L2 103 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 E9PLN8 166 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 PROM1O43490 865 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 SOAT2O75908 522 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 MATN4O95460 622 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 LPOP22079 712 aaPredicted RBP4.41□□□□□ -1.7
USP48-215ENST00000534705 RPS7P62081 194 aaKnown RBP4.41□□□□□ -1.7
USP48-215ENST00000534705 HLXQ14774 488 aaPredicted RBP4.41□□□□□ -1.7
USP48-215ENST00000534705 NXNQ6DKJ4 435 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 TAPT1Q6NXT6 567 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 B3GNT9Q6UX72 402 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 DENND1CQ8IV53 801 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 BRIX1Q8TDN6 353 aaKnown RBP4.41□□□□□ -1.7
USP48-215ENST00000534705 ZNF384Q8TF68 577 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 VKORC1Q9BQB6 163 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 IMPG2Q9BZV3 1241 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 PNPOQ9NVS9 261 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 KCTD5Q9NXV2 234 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 DMTF1Q9Y222 760 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 DNMT1P26358 1616 aaKnown RBP4.41□□□□□ -1.7
USP48-215ENST00000534705 PTPN23Q9H3S7 1636 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 MBD5Q9P267 1494 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 SPATA31A3Q5VYP0 1347 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 AGLP35573 1532 aa4.41□□□□□ -1.7
USP48-215ENST00000534705 STRCQ7RTU9 1775 aa4.4□□□□□ -1.7
USP48-215ENST00000534705 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 PPM1GO15355 546 aaPredicted RBP4.4□□□□□ -1.71
USP48-215ENST00000534705 SUN1O94901 812 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 GNAI2P04899 355 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 SRGNP10124 158 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 PLA2G5P39877 138 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 MPLP40238 635 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 FAM102BQ5T8I3 360 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 C1QL2Q7Z5L3 287 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 PPP1R32Q7Z5V6 425 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 GRAMD1CQ8IYS0 662 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 SLC17A8Q8NDX2 589 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 POC1BQ8TC44 478 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 SSH3Q8TE77 659 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 TAAR9Q96RI9 348 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 SMOQ99835 787 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 C1orf43Q9BWL3 253 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 KIAA1586Q9HCI6 787 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 ALG13Q9NP73 1137 aaKnown RBP4.4□□□□□ -1.71
USP48-215ENST00000534705 SEMA4GQ9NTN9 838 aa4.4□□□□□ -1.71
USP48-215ENST00000534705 INTS13Q9NVM9 706 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms