RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 TMC8Q8IU68 726 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 TMEM130Q8N3G9 435 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 CCDC150Q8NCX0 1101 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 SPATA20Q8TB22 786 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 ING5Q8WYH8 240 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 IRF7Q92985 503 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 SMARCE1Q969G3 411 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 TRMT2BQ96GJ1 504 aaKnown RBP16.54■□□□□ 0.24
UBXN1-217ENST00000534176 MSANTD3Q96H12 275 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 CHAMP1Q96JM3 812 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 TMEM209Q96SK2 561 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 NELL2Q99435 816 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 CRISPLD1Q9H336 500 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 FAM124BQ9H5Z6 455 aaPredicted RBP16.54■□□□□ 0.24
UBXN1-217ENST00000534176 TRIOO75962 3097 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 NOTCH4Q99466 2003 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 ZNF318Q5VUA4 2279 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 LRRIQ3A6PVS8 624 aaPredicted RBP16.53■□□□□ 0.24
UBXN1-217ENST00000534176 CST3P01034 146 aaPredicted RBP16.53■□□□□ 0.24
UBXN1-217ENST00000534176 CFHP08603 1231 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 GLULP15104 373 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 PSMC3P17980 439 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 GNL1P36915 607 aaPredicted RBP16.53■□□□□ 0.24
UBXN1-217ENST00000534176 MAGEA9P43362 315 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 PDE6CP51160 858 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 MLLT6P55198 1093 aaPredicted RBP16.53■□□□□ 0.24
UBXN1-217ENST00000534176 LRRC63Q05C16 580 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 ADAM9Q13443 819 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 NCOA4Q13772 614 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 ZACNQ401N2 412 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 ZNF667Q5HYK9 610 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 LRRTM3Q86VH5 581 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 GPR152Q8TDT2 470 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 TNIP3Q96KP6 325 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 SYT15Q9BQS2 421 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 TRMT61BQ9BVS5 477 aaKnown RBP16.53■□□□□ 0.24
UBXN1-217ENST00000534176 LRRC3Q9BY71 257 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 OSBPL6Q9BZF3 934 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 ATXN3LQ9H3M9 355 aa16.53■□□□□ 0.24
UBXN1-217ENST00000534176 MAGEC2Q9UBF1 373 aaPredicted RBP16.53■□□□□ 0.24
UBXN1-217ENST00000534176 MRPS17Q9Y2R5 130 aaKnown RBP16.53■□□□□ 0.24
UBXN1-217ENST00000534176 ZDBF2Q9HCK1 2354 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 ATP8B3O60423 1300 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 A0A1W2PRU2 124 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 TRIM66O15016 1216 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 CETN3O15182 167 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 NARSO43776 548 aaKnown RBP16.52■□□□□ 0.24
UBXN1-217ENST00000534176 C4BPAP04003 597 aaKnown RBP16.52■□□□□ 0.24
UBXN1-217ENST00000534176 PFKLP17858 780 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 ATF6P18850 670 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 GABRR2P28476 465 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 CCR2P41597 374 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 VAMP7P51809 220 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 STARD6P59095 220 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 MCCD1P59942 119 aaPredicted RBP16.52■□□□□ 0.24
UBXN1-217ENST00000534176 FAM78AQ5JUQ0 283 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 FOXR2Q6PJQ5 311 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 MFSD6LQ8IWD5 586 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 FAM186BQ8IYM0 893 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 TTC39CQ8N584 583 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 FLCNQ8NFG4 579 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 SHKBP1Q8TBC3 707 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 ZSCAN18Q8TBC5 510 aaPredicted RBP16.52■□□□□ 0.24
UBXN1-217ENST00000534176 MYCBPAPQ8TBZ2 947 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 KBTBD7Q8WVZ9 684 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 TCEAL4Q96EI5 215 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 SPATA17Q96L03 361 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 PKMYT1Q99640 499 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 XYLT2Q9H1B5 865 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 TASP1Q9H6P5 420 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 CHMP5Q9NZZ3 219 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 GTF3C4Q9UKN8 822 aa16.52■□□□□ 0.24
UBXN1-217ENST00000534176 STK25O00506 426 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 MAN2B1O00754 1011 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 DPYSL4O14531 572 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 PSMA7O14818 248 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 NCAM2O15394 837 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 GALR2O43603 387 aaPredicted RBP16.51■□□□□ 0.23
UBXN1-217ENST00000534176 CLSTN1O94985 981 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 EPB41P11171 864 aaKnown RBP16.51■□□□□ 0.23
UBXN1-217ENST00000534176 ANXA13P27216 316 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 PPP3CCP48454 512 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 MYL6P60660 151 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 GPC5P78333 572 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 FKBP3Q00688 224 aaKnown RBP16.51■□□□□ 0.23
UBXN1-217ENST00000534176 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 PNOCQ13519 176 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 TEAD2Q15562 447 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 ZCWPW2Q504Y3 356 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 TDRD10Q5VZ19 366 aaKnown RBP16.51■□□□□ 0.23
UBXN1-217ENST00000534176 YAF2Q8IY57 180 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 HS6ST3Q8IZP7 471 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 OR6B3Q8NGW1 331 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 ZNF516Q92618 1163 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 MRPS31Q92665 395 aaKnown RBP16.51■□□□□ 0.23
UBXN1-217ENST00000534176 MYRFLQ96LU7 910 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 KXD1Q9BQD3 176 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 PI4K2AQ9BTU6 479 aa16.51■□□□□ 0.23
UBXN1-217ENST00000534176 ELOVL4Q9GZR5 314 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms