RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ZNF543Q08ER8 600 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 PLS1Q14651 629 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 RRP1BQ14684 758 aaKnown RBP4.14□□□□□ -1.75
CSMD3-210ENST00000534172 CLASRPQ8N2M8 674 aaKnown RBP4.14□□□□□ -1.75
CSMD3-210ENST00000534172 C1orf131Q8NDD1 294 aaKnown RBP4.14□□□□□ -1.75
CSMD3-210ENST00000534172 KBTBD7Q8WVZ9 684 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 ISCA1Q9BUE6 129 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 MYLK2Q9H1R3 596 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 GSTO2Q9H4Y5 243 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 GPR35Q9HC97 309 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 STARD7Q9NQZ5 370 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 RNF181Q9P0P0 153 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 STAP2Q9UGK3 403 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 GPR52Q9Y2T5 361 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.14□□□□□ -1.75
CSMD3-210ENST00000534172 TCOF1Q13428 1488 aaKnown RBP4.14□□□□□ -1.75
CSMD3-210ENST00000534172 CAMSAP1Q5T5Y3 1602 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 TCRBV7S2A1N4TA0A589 114 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 AGR2O95994 175 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 RARBP10826 455 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 XRCC6P12956 609 aaKnown RBP eCLIP4.14□□□□□ -1.75
CSMD3-210ENST00000534172 SCNN1GP51170 649 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 NHLH2Q02577 135 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 KIF22Q14807 665 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 SPDYE7PQ495Y7 208 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 AMOTQ4VCS5 1084 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 CCDC93Q567U6 631 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 RABL3Q5HYI8 236 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 ZNF585AQ6P3V2 769 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 DCBLD1Q8N8Z6 715 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 WWC2-AS2Q96NR7 200 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 CPEB1Q9BZB8 566 aaKnown RBP4.14□□□□□ -1.75
CSMD3-210ENST00000534172 PCDHGB2Q9Y5G2 931 aa4.14□□□□□ -1.75
CSMD3-210ENST00000534172 CD109Q6YHK3 1445 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 FGD5Q6ZNL6 1462 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 WDR7Q9Y4E6 1490 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 POM121BA6NF01 834 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 LRRC14BA6NHZ5 514 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 EPB41L2O43491 1005 aaKnown RBP4.13□□□□□ -1.75
CSMD3-210ENST00000534172 MAPK10P53779 464 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 SATB1Q01826 763 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 ZNF844Q08AG5 666 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 SLC44A4Q53GD3 710 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 AGAP9Q5VTM2 703 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 MED25Q71SY5 747 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 GDF7Q7Z4P5 450 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 LIX1LQ8IVB5 337 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 FBXO18Q8NFZ0 1043 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 TBC1D15Q8TC07 691 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 MPP4Q96JB8 637 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 GPR20Q99678 358 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.13□□□□□ -1.75
CSMD3-210ENST00000534172 PGAP2Q9UHJ9 254 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 PADI4Q9UM07 663 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 ABCA10Q8WWZ4 1543 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 PNPLA7Q6ZV29 1317 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 E7ENX8 843 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 GJB1P08034 283 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 TSHRP16473 764 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 MAPK9P45984 424 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 CHN2P52757 468 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 POU6F2P78424 691 aaPredicted RBP4.13□□□□□ -1.75
CSMD3-210ENST00000534172 TAP2Q03519 686 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 MYBPC2Q14324 1141 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 R3HDM1Q15032 1099 aaKnown RBP4.13□□□□□ -1.75
CSMD3-210ENST00000534172 PUM3Q15397 648 aaKnown RBP4.13□□□□□ -1.75
CSMD3-210ENST00000534172 CCDC38Q502W7 563 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 KHDC1LQ5JSQ8 128 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 L1TD1Q5T7N2 865 aaKnown RBP4.13□□□□□ -1.75
CSMD3-210ENST00000534172 JAKMIP3Q5VZ66 844 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 Q6ZRM9 215 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 KRTAP1-3Q8IUG1 177 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 IL31RAQ8NI17 732 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 ANKS1AQ92625 1134 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 ANP32BQ92688 251 aaKnown RBP4.13□□□□□ -1.75
CSMD3-210ENST00000534172 TRIM63Q969Q1 353 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 ZC3H10Q96K80 434 aaKnown RBP4.13□□□□□ -1.75
CSMD3-210ENST00000534172 KIAA1586Q9HCI6 787 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 FPGT-TNNI3KV9GXZ4 949 aa4.13□□□□□ -1.75
CSMD3-210ENST00000534172 NEO1Q92859 1461 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 CDK13Q14004 1512 aaKnown RBP4.12□□□□□ -1.75
CSMD3-210ENST00000534172 C3P01024 1663 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 TIMM44O43615 452 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 HSD3B1P14060 373 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 ICA1Q05084 483 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 KCTD2Q14681 263 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 PRR16Q569H4 304 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 FAM102AQ5T9C2 384 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-210ENST00000534172 UTP14CQ5TAP6 766 aaKnown RBP4.12□□□□□ -1.75
CSMD3-210ENST00000534172 C1QL3Q5VWW1 255 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 HIBCHQ6NVY1 386 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-210ENST00000534172 UBE3BQ7Z3V4 1068 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 C1orf210Q8IVY1 113 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 SYNE4Q8N205 404 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 RNF169Q8NCN4 708 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 GCC1Q96CN9 775 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 SMOQ99835 787 aa4.12□□□□□ -1.75
CSMD3-210ENST00000534172 EIF2AK1Q9BQI3 630 aaKnown RBP4.12□□□□□ -1.75
CSMD3-210ENST00000534172 CNPPD1Q9BV87 410 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms