RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 ACRBPQ8NEB7 543 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 HPS1Q92902 700 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 C16orf45Q96MC5 204 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 ALS2CR12Q96Q35 445 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 MMS19Q96T76 1030 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 AGPAT1Q99943 283 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 BCO2Q9BYV7 579 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 CXCL16Q9H2A7 254 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 APOBEC3GQ9HC16 384 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 CISHQ9NSE2 258 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 MIOSQ9NXC5 875 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 SIX4Q9UIU6 781 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 AJAP1Q9UKB5 411 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 CNTN6Q9UQ52 1028 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 PCDHA13Q9Y5I0 950 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 TRIP11Q15643 1979 aa11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 FNDC1Q4ZHG4 1894 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-218ENST00000533761 H3BM21 787 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 ALDH2P05091 517 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 PLEKP08567 350 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 GZMAP12544 262 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 LRPAP1P30533 357 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 GNA15P30679 374 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 ASPAP45381 313 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 SMAD3P84022 425 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 DSC1Q08554 894 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 NAB2Q15742 525 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 SPOUT1Q5T280 376 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 C9orf57Q5W0N0 161 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF571Q7Z3V5 609 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF280BQ86YH2 543 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 RBBP8NLQ8NC74 664 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 TRIM11Q96F44 468 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 PBX4Q9BYU1 374 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 LZTFL1Q9NQ48 299 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 NAGPAQ9UK23 515 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 KIAA1257Q9ULG3 409 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 RWDD3Q9Y3V2 267 aa11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 TDRD15B5MCY1 1934 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-218ENST00000533761 A0A087X0T9 212 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 HUS1O60921 280 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 DDHD2O94830 711 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 KIF4AO95239 1232 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 CA3P07451 260 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 PAEPP09466 180 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 FAM163BP0C2L3 166 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 FAM228BP0C875 321 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 LAG3P18627 525 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 STILQ15468 1287 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 DPH6Q7L8W6 267 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 GLYCTKQ8IVS8 523 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 COLGALT2Q8IYK4 626 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 RNF10Q8N5U6 811 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 MSANTD4Q8NCY6 345 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 KIF18AQ8NI77 898 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 CTNNBL1Q8WYA6 563 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 CLP1Q92989 425 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 KAT5Q92993 513 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 ARID3AQ99856 593 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 TMEM175Q9BSA9 504 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 NRDE2Q9H7Z3 1164 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 SLC28A3Q9HAS3 691 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 TUBGCP4Q9UGJ1 667 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 BARX2Q9UMQ3 279 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 PCDHB12Q9Y5F1 795 aa11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 MRPL42Q9Y6G3 142 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-218ENST00000533761 ANO9A1A5B4 782 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 LCHNA4D1U4 455 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 LINC01553A4QN01 128 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 KPNA7A9QM74 516 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 PIRO00625 290 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 LSM8O95777 96 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 H2AFZP0C0S5 128 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 PNMA6AP0CW24 399 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 TNNT1P13805 278 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 MYOGP15173 224 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 CD58P19256 250 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 ACO1P21399 889 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 BCAR1P56945 870 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 ETF1P62495 437 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 CYP27A1Q02318 531 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 SCARA5Q6ZMJ2 495 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 H2AFVQ71UI9 128 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 SLC47A2Q86VL8 602 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 UNC93AQ86WB7 457 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 REXO1L1PQ8IX06 675 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 C17orf53Q8N3J3 647 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 APPL2Q8NEU8 664 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 TRIM58Q8NG06 486 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 CXorf38Q8TB03 319 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 SECISBP2LQ93073 1101 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 C18orf25Q96B23 403 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 CWH43Q9H720 699 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 GDAP2Q9NXN4 497 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 PUF60Q9UHX1 559 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 NOCTQ9UK39 431 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 FAN1Q9Y2M0 1017 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 PAXBP1Q9Y5B6 917 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms